| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1333 |
|---|
| Symbol | |
|---|
| ID | 4021810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1501765 |
|---|
| End bp | 1502280 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961526 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_568472 |
|---|
| Protein GI | 91975813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCT GGCTGGAGGC GATGTTGCGG GTCGGCCGCA AACTGTTCGT CAAGGCGGAG
ACCCAGCTCT ATCCGGAGGA GAAGCCGAAG CTGTATCCGC GCAGCCGCGG CCGCATCGTG
CTGACCCGCG ATCCGGACGG TCAGGAGCGC TGCGTCGCCT GCAACCTGTG TGCGGTGGTG
TGCCCGGTCG GCTGCATCGA CCTCACCAAA GCGGTGGCCG ACGACGGCCG CTGGTACCCT
GAACATTTCC GCATCAATTT CGCGCGCTGC ATCTTCTGCG GCTTCTGCGA GGAGGCGTGC
CCGACCTCGG CGATCCAGCT CACGCCGGAT TTCGAACTCG GCGAGTGGCG GCGCGACGCG
CTGGTCTACG AGAAGCACGA TCTTCTGATC TCCGGCGAGG GCAAGGTGCG CGGCTATCGC
TACTGGTCGG TTGCCGGCAA GGCGATCGAC GGCAAGGACA AGGGCGAGGC GGAGCACGAA
TCCCCGCCGG TCGACTTGAG GGGGCTGCTG CCATGA
|
|---|
| Protein sequence | MIGWLEAMLR VGRKLFVKAE TQLYPEEKPK LYPRSRGRIV LTRDPDGQER CVACNLCAVV
CPVGCIDLTK AVADDGRWYP EHFRINFARC IFCGFCEEAC PTSAIQLTPD FELGEWRRDA
LVYEKHDLLI SGEGKVRGYR YWSVAGKAID GKDKGEAEHE SPPVDLRGLL P
|
|---|
| |