Gene RPD_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1332 
Symbol 
ID4021809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1500809 
End bp1501768 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID637961525 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_568471 
Protein GI91975812 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC TCATCATCAC CGCGACGATT TCGGTCACCC TGATCATGGT GCTGCTGGTG 
GTCGCCGGCA CTTTCACCTG GGTGGAGCGG CGACTGCTCG GCTTCGTGCA GGAGCGGCTC
GGGCCGAACC GCGTCGGGCC GTTCGGTTCG CTGCAATGGA TCGCCGACAC CGTCAAGATT
CTCACCAAGG AGGATCGCCC GCCGCCCGGT GCCGACAAGT TCGCCTACAT CCTTGCGCCC
GCGGTCGCCG CGACGCCGGT GCTCGCCGGC TTCGGCGTCA TCGAATTCGG CGACGGCCTG
TCGCTCGCCG CGGTCGATGT CGGCGTGCTG TTTCTGATCG GCATGTTGGG TCTCACCGCC
TATGCCGTGG TGCTCGGCGC CTGGGCGTCG CACAGCCGCT TCGCGCTGAT GGGCGGGATG
CGCGCCGCGG CGCAGATGCT CGCTTACGAA GTGTTCCTCG GCCTGTCGCT GATGGGCGCA
GTCATGCTTG CCGGTTCGCT CTCGATGAAC GCGATTGTCG AGGCGCAGCG CGACGTCTGG
TTCGTTGTGC TGCAGCCGCT CGGCGCGGCG CTGTTCTGCA TCGCCGGCGT CGCCGCCGCG
CACCGGCTGC CGTTCGATCT GCCGGAGTCC GAGAACGACC TCGTCGCCGG CTTCATGACC
GAGTACACCG GCATGTCGTT CGGTCTGTTC TTCCTCGGCG AATATCTTGC GGTGCTGCTG
GTGTCGGCCC TGGCGGTGAC GCTGTTTTTC GGCGGCTGGC TGGGGCCGTG GCTGCCGGGG
CCGATCTGGT TCGGACTGAA GACGGGGGTG ATCGCCGTGG TGTTCGTCTG GCTGCGCGCG
ACGCTGCCGC GGCCGCGCTA CGACCAGTTA CTGAGTTTCG CCTGGAAGAT CGCGCTGCCG
TTGTCGCTGG CCAATCTGCT GCTGACCGGC ATCGTCGTGG TGGCGAGGAG CGCGTCATGA
 
Protein sequence
MIGLIITATI SVTLIMVLLV VAGTFTWVER RLLGFVQERL GPNRVGPFGS LQWIADTVKI 
LTKEDRPPPG ADKFAYILAP AVAATPVLAG FGVIEFGDGL SLAAVDVGVL FLIGMLGLTA
YAVVLGAWAS HSRFALMGGM RAAAQMLAYE VFLGLSLMGA VMLAGSLSMN AIVEAQRDVW
FVVLQPLGAA LFCIAGVAAA HRLPFDLPES ENDLVAGFMT EYTGMSFGLF FLGEYLAVLL
VSALAVTLFF GGWLGPWLPG PIWFGLKTGV IAVVFVWLRA TLPRPRYDQL LSFAWKIALP
LSLANLLLTG IVVVARSAS