Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1332 |
Symbol | |
ID | 4021809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1500809 |
End bp | 1501768 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961525 |
Product | respiratory-chain NADH dehydrogenase, subunit 1 |
Protein accession | YP_568471 |
Protein GI | 91975812 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCC TCATCATCAC CGCGACGATT TCGGTCACCC TGATCATGGT GCTGCTGGTG GTCGCCGGCA CTTTCACCTG GGTGGAGCGG CGACTGCTCG GCTTCGTGCA GGAGCGGCTC GGGCCGAACC GCGTCGGGCC GTTCGGTTCG CTGCAATGGA TCGCCGACAC CGTCAAGATT CTCACCAAGG AGGATCGCCC GCCGCCCGGT GCCGACAAGT TCGCCTACAT CCTTGCGCCC GCGGTCGCCG CGACGCCGGT GCTCGCCGGC TTCGGCGTCA TCGAATTCGG CGACGGCCTG TCGCTCGCCG CGGTCGATGT CGGCGTGCTG TTTCTGATCG GCATGTTGGG TCTCACCGCC TATGCCGTGG TGCTCGGCGC CTGGGCGTCG CACAGCCGCT TCGCGCTGAT GGGCGGGATG CGCGCCGCGG CGCAGATGCT CGCTTACGAA GTGTTCCTCG GCCTGTCGCT GATGGGCGCA GTCATGCTTG CCGGTTCGCT CTCGATGAAC GCGATTGTCG AGGCGCAGCG CGACGTCTGG TTCGTTGTGC TGCAGCCGCT CGGCGCGGCG CTGTTCTGCA TCGCCGGCGT CGCCGCCGCG CACCGGCTGC CGTTCGATCT GCCGGAGTCC GAGAACGACC TCGTCGCCGG CTTCATGACC GAGTACACCG GCATGTCGTT CGGTCTGTTC TTCCTCGGCG AATATCTTGC GGTGCTGCTG GTGTCGGCCC TGGCGGTGAC GCTGTTTTTC GGCGGCTGGC TGGGGCCGTG GCTGCCGGGG CCGATCTGGT TCGGACTGAA GACGGGGGTG ATCGCCGTGG TGTTCGTCTG GCTGCGCGCG ACGCTGCCGC GGCCGCGCTA CGACCAGTTA CTGAGTTTCG CCTGGAAGAT CGCGCTGCCG TTGTCGCTGG CCAATCTGCT GCTGACCGGC ATCGTCGTGG TGGCGAGGAG CGCGTCATGA
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Protein sequence | MIGLIITATI SVTLIMVLLV VAGTFTWVER RLLGFVQERL GPNRVGPFGS LQWIADTVKI LTKEDRPPPG ADKFAYILAP AVAATPVLAG FGVIEFGDGL SLAAVDVGVL FLIGMLGLTA YAVVLGAWAS HSRFALMGGM RAAAQMLAYE VFLGLSLMGA VMLAGSLSMN AIVEAQRDVW FVVLQPLGAA LFCIAGVAAA HRLPFDLPES ENDLVAGFMT EYTGMSFGLF FLGEYLAVLL VSALAVTLFF GGWLGPWLPG PIWFGLKTGV IAVVFVWLRA TLPRPRYDQL LSFAWKIALP LSLANLLLTG IVVVARSAS
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