Gene RPD_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1331 
Symbol 
ID4021808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1498194 
End bp1500812 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content70% 
IMG OID637961524 
ProductNADH dehydrogenase subunit G 
Protein accessionYP_568470 
Protein GI91975811 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID[TIGR01973] NADH-quinone oxidoreductase, chain G 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA AGATCGAGAT CGATGGACGC GTGATCGAGG CCGGCGACGG CGACGATCTG 
TTGTCGGCAT GTCTGACCCA TGGCATCGAC GTGCCGTATT TCTGCTGGCA CGGCGCGCTC
GGCTCGGTCG GCGCCTGCCG GCAATGCGCG GTGAAAGTCT ATTCCGGCCC CGACGACACC
GAAGGCCGCA TCGTGATGTC GTGCATGACC CCGGTCGCCG ATGTCGAGCG CGTGTCCGTC
AGCGACCCCG AAGCTGCGCA GTTCCGCGCG CAGGTGATCG AATGGTTGAT GGTCAATCAT
CCGCACGATT GCCCGGTCTG CGAAGAGGCC GGCTCCTGCC ATCTGCAGGA CATGACGATC
GCCACCGGCC ATAACATCCG CCGCTATCGC TTCGACAAGC GCACCCATCG CAATCAGGAT
CTCGGGCCGC TGCTGACGCA CGAGATGAAC CGCTGCATCG CCTGCTATCG CTGCACCCGG
TTCTATCGCG ACTATGCCGG CGGCCGCGAC CTCGACGCCT TCGGCGCGCA CGACAACGTG
TATTTCGGCC GCGCCGAGGA CGGTCCGTTG GAGAGCCCGT TCGCCGGCAA TCTGGCCGAG
GTCTGCCCGA CCGGCGTGTT CAACGACAAG GGCTGGTCGC AAGACTACGC CCGCAAATGG
GACATGCGCG CGACGCCGTC GGTCTGTCCG CATTGCGCGG TCGGCTGCAA CATCCTGGTC
GACCAGCGCG GCGGACGGGT CAAGCGGGTG CAGAACCGCT ATCATGGCGC GCTCAACGGC
TACTTCATCT GCGATCGCGG CCGGTATGGC CCGCTGCACG TCGTCTCCGA TGCGCGGTTG
CTGACGCCGC TGATAAACGG CGAAGCGGCC GGCGAGCATG ACGCCTGCGC GGCGGCGCAC
GCCGCGGTCG CCGAAGGCGC AATCGGCATC GGTTCGCCCC GCGCCTCGCT GGAGGCGAAC
TACGCGCTGC AGCGTTTGGT CGGACCGGAA CGTTTCTTCG CCGGCGTCTC GGACGCCGAA
GCCGCGATGG TCCGGCGTAT CGTGGCCATT CTGCGCGCCG GCCCGGCGCA GATCGCCTCA
CTCGCGGATG TCGAACAAGC CGACGCGGTG CTGGTGCTCG GCGAAGATCT CACCAACACG
TCCCCGCGCA TCGCGCTGGC GTTGCGCCAG ACCGCGCGCG GCGCCGAGCG CGAGCTCGCC
GCGCAAAAGG GCGTGCCGCA GTGGCTCGAT CCGGCGGTTC GTGTCGCCGG TGAAGGCCGC
CGTTCGCCGA TCATCCTCGC GACGCCGGTC ATCGATCCGC TCGACGACAT TGCGGCGCTG
GCTCTGCGCC GCGATCCGCA GGCGATCGCA AATTTCGGCG CAAGCCTCGC CGCCGCGCTC
GGCGGCGTCG CGAGCGCAGA TGCCGACGCA AACCGCGTCG CCGAGATTCT CGCGGCTGCC
GAGCGCCCGC TGATCATCGC CGGTTGCTCG CTCGGGACAG CCGGCATCAT CGAAGCCGCC
GCGGCGCTCG TCTCGACGCT CGGTCCCAAG GCGCGGATCG CGCTGCTGCC GCCGGAGGCC
AACAGCATCG GCCTGGCGTT GCTCGGCGGC GACGGCGTCG AGAGCGCTGC TGCGCTGCTG
GAGCGCGGCG CGGCCAAGGC CGCGATCGTG CTCGAAAGCG ATCTGTTCGA ACGCGCGCCG
CGCGCCAGCG TCGAGCGGCT GTTCGCCGCC GCCAAATCCG TGGTCGTGCT GGATTCGATG
GCCAGCGAGA CCACCGCGCG CGCGTCGATC GCGCTGCCGG TCGCGCCTTT CACCGAATGC
GCCGGGACCT TCGTCAACTA CGAAGGCCGC GCGCAACGCT TCTTCGCCGC AGTGCCGTCG
TCCGAAGCGA CGCCTGCGTC GTGGCGCCGG CTCGACGTGT TCGGCGCCGG CGACTGGCAC
GGGCTCGACG CGTTGATCGG CGACCTGATC GTCGAGCGTC CCGATCTGGT CGGCGTCGCG
GATGCCGCGC CCGATGCCGA TTTCATGATG GCCGACGGCC AGGTGACCCG TGCGCCGCGG
CCCTATTCCG GCCGCACGGC TGACGACCGC GCCGGTCAGT TCGCCGACGC AGCGCCGCCG
ATCGATCTCG ACGGGCCGAT GACTTTCGGC ATCAAGGGCG CGCGCGGCAC CGCCGTGCCG
CCGGCGCTGA TCACCAGCTA CAAGACCTCA GGGCACCACT CCGCCAACAA CGTCACGCGC
TTCATGGAAG AGGTCGGCGG CCCGCTGCGC GGCGGCGATC CCGGCGCGAT GCTGCTGAAG
GCGGGCGAAG CATCGCTGCC CGACGCGCCG CCGTCTCGGG CGGTCGAAGG CGACGGGCTG
TTGCTGGTGC CGTTGCACGA CGCGTTCTCC GGCTGGGAGT TGAGCCGCGC CAGCGCGCTG
CTCGCCGCGC GCGCGCCGGC GCCGCGGCTC CTGCTGCATC CTGACGACGC TGCGCTGCAT
GGCCTCACGC AAGGCGCCGC CGCGCTGATC GACGGCCGGC TTTACCCCGC GACGGTTTCG
CTCGATGCCT CGCTGCCACG CGGCACGGTG GCGATCAGCG CCGGCGTCGG CGTGCCGCGC
GGGCCGCTGC ACCGCGTCCG GGTGGAGGCG GCGCGATGA
 
Protein sequence
MTRKIEIDGR VIEAGDGDDL LSACLTHGID VPYFCWHGAL GSVGACRQCA VKVYSGPDDT 
EGRIVMSCMT PVADVERVSV SDPEAAQFRA QVIEWLMVNH PHDCPVCEEA GSCHLQDMTI
ATGHNIRRYR FDKRTHRNQD LGPLLTHEMN RCIACYRCTR FYRDYAGGRD LDAFGAHDNV
YFGRAEDGPL ESPFAGNLAE VCPTGVFNDK GWSQDYARKW DMRATPSVCP HCAVGCNILV
DQRGGRVKRV QNRYHGALNG YFICDRGRYG PLHVVSDARL LTPLINGEAA GEHDACAAAH
AAVAEGAIGI GSPRASLEAN YALQRLVGPE RFFAGVSDAE AAMVRRIVAI LRAGPAQIAS
LADVEQADAV LVLGEDLTNT SPRIALALRQ TARGAERELA AQKGVPQWLD PAVRVAGEGR
RSPIILATPV IDPLDDIAAL ALRRDPQAIA NFGASLAAAL GGVASADADA NRVAEILAAA
ERPLIIAGCS LGTAGIIEAA AALVSTLGPK ARIALLPPEA NSIGLALLGG DGVESAAALL
ERGAAKAAIV LESDLFERAP RASVERLFAA AKSVVVLDSM ASETTARASI ALPVAPFTEC
AGTFVNYEGR AQRFFAAVPS SEATPASWRR LDVFGAGDWH GLDALIGDLI VERPDLVGVA
DAAPDADFMM ADGQVTRAPR PYSGRTADDR AGQFADAAPP IDLDGPMTFG IKGARGTAVP
PALITSYKTS GHHSANNVTR FMEEVGGPLR GGDPGAMLLK AGEASLPDAP PSRAVEGDGL
LLVPLHDAFS GWELSRASAL LAARAPAPRL LLHPDDAALH GLTQGAAALI DGRLYPATVS
LDASLPRGTV AISAGVGVPR GPLHRVRVEA AR