| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1328 |
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| Symbol | |
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| ID | 4021805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1494699 |
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| End bp | 1496444 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961521 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_568467 |
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| Protein GI | 91975808 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.13144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCA CCGACCTCGT CAGCGAACTC AGTGCGCGGT TTGGAGACGC GGTGCTGGGT
GAGCAGATCA CGCGCGAGCG GTTTCCGACG GTGTGGATCC GTCCGGAGGC GTCGGCCGCC
GTGCATCGAT TCCTGAAGCA CGAGGTCGAT CGTCCGTTCC GGATGCTGGT CGATCTATGG
GCGATCGACG AGACCGCGCG AAAACATCGC GAGGGTCAGC CGCCGTCGGG CATCACCATC
GCCAGCCATC TGATGTCGCA CGAGCGCAAC GCCGACATCC GGCTGAAGAT TGCGCTCGAC
GCCGAGTATC CGAGCACGAA GTCGATTGCC GGGGTGTTTC CCAACGCGGC GTGGTACGAG
CGCGAAGCCT ACGACATGTT CGGCGTCGAG TTCGAATTGC AGCCGCACTC GCAGCGCATC
CTGCTGCCGC CCGGATGGGA AGGCCATCCG ATGCGCAAGA CCCAGCCGGG TCGCGCAACC
GAGCGGCCGC TGTTCAACAT GACCGCGGCG TTGTTCGACG CCAAGGAACA TGCGCTCGCG
GCTGATCCGG AAAAATTCGG CCTGCCGACG CATCGTGACG GCGTCGAGCT GATGATCCTG
AATTACGGGC CGCACAGCAT GGCGACCCAT GGCGTGTTCC GCATCGTGCT GGCGCTCGAC
GGCGAGGAGA TCGTCGCGGC GCGGCCCGAC ATCGGCTTCC ATCATCGCGG CGCCGAGAAG
ATGGCCGAGC GCCAGACCTG GCACAGCTTC CTGCCCTACA CCGACCGCGT CGACTATCTC
GGCGGGGTGA TGGGCGAGAT GCCGTATCTG CAGGCGGTGG AAAAAGCCTG CGGCATCACC
GTGCCGGATC GCGCACTCAT GGTCCGGGTG ATGCTGTCGG AAATATTCCG CATCATGAAT
CACCTGCTGT TCTACGGCAC CATGGCGCAG GACACCGGGG CGATGTCGCC GGTGTTCTAC
ATGTTCGTCG ATCGCGAGCG CGCCTACCGG GTGATCGAGT CGATCACCGG CGCGCGGATG
CACCCCGGCT TCTTCCGCAT CGGCGGACTG TCGATGGACC TGCCGCAAGG CTGGGATGGA
CTCGTGCGCG AATTCCTCGA CTGGATGCCA TCGCGGCTCG ACGACTACGA AGGCATGGTG
TTGCGCAACG AAATCTTCCG CGCACGCACC AAGGGCGTCG GCGCCTACGA CACCGCGATG
GCGCTCGATT GGGGCGTGAC CGGGCCGGGA CTGCGCGCCA CCGGCTATGC CTGGGACGTG
CGGAAAGCGC GGCCCTATGC CGGTTTCGAA AATTTCGATT TCGAGATTCC AGTCGGGGTC
AACGGCGACT GTTTCGACCG CACGGTGGTG CGGGTCGAGG AGATCCGGCA GTCGCTGAAG
ATCATCCGGC AGTGCGTCGA CAACATGCCG TCTGGCCCGA TCAAGGCCGA CCACCCTCTG
ACCACGCCGC CGCCGCGCGA GCGGATGCTG CACGACATCG AGACCATGAT CCATCATTTC
GTCGGCGCGA GCTGGGGCCC TGTGTTGCCC GCTGGAGAAT ACACCGGCCA GGTCGAGACC
GTGCGCGGGC TGACGCAGTT CGCGCTGATC TCCGACGGCG AGCCGTCGAG CTATCGCACC
CGGATCCGCA CGCCGTCATT CGCGCATCTG CAGATGATCT CGGCGGTGGC GCCGGGCATG
ATGGTGGCCG ATCTCGTCGC ATTTCTCGGG AGCATCGACT ACGTGATGTC GGACGTCGAC
CGATGA
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| Protein sequence | MSGTDLVSEL SARFGDAVLG EQITRERFPT VWIRPEASAA VHRFLKHEVD RPFRMLVDLW
AIDETARKHR EGQPPSGITI ASHLMSHERN ADIRLKIALD AEYPSTKSIA GVFPNAAWYE
REAYDMFGVE FELQPHSQRI LLPPGWEGHP MRKTQPGRAT ERPLFNMTAA LFDAKEHALA
ADPEKFGLPT HRDGVELMIL NYGPHSMATH GVFRIVLALD GEEIVAARPD IGFHHRGAEK
MAERQTWHSF LPYTDRVDYL GGVMGEMPYL QAVEKACGIT VPDRALMVRV MLSEIFRIMN
HLLFYGTMAQ DTGAMSPVFY MFVDRERAYR VIESITGARM HPGFFRIGGL SMDLPQGWDG
LVREFLDWMP SRLDDYEGMV LRNEIFRART KGVGAYDTAM ALDWGVTGPG LRATGYAWDV
RKARPYAGFE NFDFEIPVGV NGDCFDRTVV RVEEIRQSLK IIRQCVDNMP SGPIKADHPL
TTPPPRERML HDIETMIHHF VGASWGPVLP AGEYTGQVET VRGLTQFALI SDGEPSSYRT
RIRTPSFAHL QMISAVAPGM MVADLVAFLG SIDYVMSDVD R
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