Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1327 |
Symbol | |
ID | 4021804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1494076 |
End bp | 1494702 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961520 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_568466 |
Protein GI | 91975807 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.107913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTCC CACCCGCAAT TCCGCCAACG CCGGCCGATT CGATGTCGGT CGAAGAGCAC ATGGCGCGGA GCAATCTGTT CACCACGCTC GAGGACCTCA CCGCGTGGTC GCGCAAGCAC AGCCTGTGGC CGTTCAATTT CGGACTGTCG TGTTGCTATG TTGAACAGGT TACCGTGCTG ACGCCGGTGT ACGATCAGGC GCGCTTCGGC GCCGAGGTCA TCCGCGCCTC GCCGCGCCAG GCGGATCTGC TGGTCGTGTC GGGCACCGTG TTTCACAAGA TGGCCGCGCC TCTGCTGCGA CTGTACGAGC AGATGCGCGC ACCGCGCTGG GTGATTTCGA TGGGCGCCTG CGCCAATTCC GGCGGCATGT ACGACATTTA CTCGGTGGTG CAGGGCGTCG ATCGTTTCAT TCCGGTCGAT GTCTACATTC CCGGCTGTCC GCCGCGGCCG GAAGCGATGC TCGACGCGCT GATCATGCTG CAGCAACAGA TCGGCAGCGA GCGCCGGCCG CTCGGCGTCA CCGTCGGCAA CACCGCCGGT CTCGGCTTCG ACGCGCCGCG CCGGCGCGAC CAGCGTCGCG ACGAACGCAT GGCGCAGACC CTTCTCGATC CCCCGGAGAA ATTGTGA
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Protein sequence | MTLPPAIPPT PADSMSVEEH MARSNLFTTL EDLTAWSRKH SLWPFNFGLS CCYVEQVTVL TPVYDQARFG AEVIRASPRQ ADLLVVSGTV FHKMAAPLLR LYEQMRAPRW VISMGACANS GGMYDIYSVV QGVDRFIPVD VYIPGCPPRP EAMLDALIML QQQIGSERRP LGVTVGNTAG LGFDAPRRRD QRRDERMAQT LLDPPEKL
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