Gene RPD_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1326 
Symbol 
ID4021803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1493690 
End bp1494079 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content69% 
IMG OID637961519 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 3 
Protein accessionYP_568465 
Protein GI91975806 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0773162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGACC TGATCTTTCC GATCAATCCA GGTGCTGCAC TCGCCATCCA TGTCGCGCTG 
TCCGCGGGCA TCGTCGCGGC GATCATCGTG GTCGCCGCCT GGCTGCGCGA GAAGCGCTCC
GGCGCGCGCG CCGACGTCCC CTACGAGGGC GGCGTGCTGC CGGCTGCGCC GCAGCAGGGG
CCGGTCAATG CGCCGTACTT CCTGATCGCC GCGCTGTTCG TGATCTTCGA TATGGAGGCG
GCGATCCTGT TCGCCTGGGC GGTGGCGGCG CGCGACACCG GCTGGCTCGG CCTGATCGAG
GCCGCCGTGT TTATCGGCGT GCTGCTGCTG GCGCTGGTCT ATCTGTGGGC CGACGGCGCG
TTGGACTGGC ACAAGGAGCG CCGCCGATGA
 
Protein sequence
MGDLIFPINP GAALAIHVAL SAGIVAAIIV VAAWLREKRS GARADVPYEG GVLPAAPQQG 
PVNAPYFLIA ALFVIFDMEA AILFAWAVAA RDTGWLGLIE AAVFIGVLLL ALVYLWADGA
LDWHKERRR