| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1323 |
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| Symbol | |
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| ID | 4021800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1487908 |
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| End bp | 1489593 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961516 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_568462 |
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| Protein GI | 91975803 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGGA ACTGGCTCAA GCACTACCCA CCGGGCGTGC CGGCGGACAT CGACGTGACG
CAATACGCCT CGCTGGTCGA CCTGCTCGAG GAGAGCTTCA GAAATTTCGG CGATCGCAAG
GCCTTCATCT GCATGGACAA GGCGATCAGC TATCGCGAGC TGGACGAGAT GTCGGCCGCG
CTCGGCGCCT ACCTGCAGGG AAAGGGCCTG CAGAAGGGCG CCCGCGTCGC GCTGATGATG
CCGAACGTGC TGCAATATCC GGTCGCGATC GCGGCGGTAC TGCGCGCCGG CTTCGCCGTC
GTCAACGTCA ACCCGCTTTA CACTCCGCGG GAGCTCGAGC ATCAGCTCAA GGACTCCGGC
GCCGAGGCGA TCATCGTGCT GGAGAACTTC GCCAGTACCG TCGAACAGGT GATCGCCAAG
ACCGCCGTCA AACAGATTAT CGTCGCCACG ATGGGCGACA TGCTCGGTTT CAAGGGCGTG
ATCGTCAATT TGGTGGTGCG CAAGGTCAAG AAGATGGTGC CGGCCTACTC GCTACCCGGC
GCGGTGCCTT ACAATGACGC GGTTGCCGCA GGCCGCAGCC TGAAGCTCAC CAAGCCGACG
CTCGGCCCCG ACGACGTGGC CTTCCTGCAA TACACCGGCG GCACGACTGG CGTGTCAAAG
GGCGCGACAC TGCTGCACCG CAACGTCGTC GCCAACGTGC TGCAGAACGA CGCCTGGCTG
CAACCGGCGC TGGCGAAGCC GCCGCATGTC GACCAGTTGT TCATCGTCTG CGCGCTGCCG
CTCTATCACA TCTTCGCGCT GACCGCCTGC TACCTGCTGG GGATGCGCGC AGGCGGCGTC
AACCTGCTGA TCCCCAATCC GCGCGACATG CCGGGCTTCA TCAAAGAGTT GATGAAGTAT
CAGGTCAACA GCTTCCCGGC CGTCAACACG CTGTACAATG GCCTGCTGCA TTCGCCCGGC
TTCGACAAGG TCGACTTCTC CAAGTTGAAG ATTTCCAACG GCGGCGGCAT GGCGGTGCAG
CGGCCCGTCG CCGAAGCCTG GCTGAAGATG ACCGGTTGCC CGATCGCCGA AGGATACGGC
CTGTCGGAGA CCGCGCCGGT GTTGACCTGC AACCCCGCCA CCGTCACCGA ATTTAACGGC
ACGATCGGCG TGCCGGTGCC GTCGACAGAT ATTTCGATCC GCGACGACGA GGGCAAGGAA
GTGCCGTTCG GCACCGCCGG CGAAATCTGC GCCAAGGGTC CGCAGGTGAT GGTCGGCTAC
TGGAACAGGC CGGACGAGAC CGCGCTGGTG ATGACCGCCG ACGGCTATTT CCGCACCGGC
GATGTCGGCA TCATGAGCGA GGACGGCTAC ACCAAGATCG TCGACCGCAA GAAGGACATG
ATCCTGGTCT CCGGCTTCAA CGTCTATCCG AACGAGGTCG AGGAAGTGAT CGCGAGCCAT
CCCGGCGTGA TGGAATGCGC CGTGATCGGC GTGCCCGACA AGCGCACCAG CGAGGCGGTC
AAGGCGTTCA TCGTCAAGAA GGATCCCGAC CTCACCGCCG AGGACATCAT CAAGTTCTGT
CACACCCAGC TCACCAACTA CAAAGTGCCA CGGCAGATCG AATTCCGAAC CTCGCTGCCG
AAGACCAATG TCGGCAAGAT CCTCCGCCGC GAATTGCGGG ACGAGAAGAA GCAGGCGGCT
GCCTGA
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| Protein sequence | MERNWLKHYP PGVPADIDVT QYASLVDLLE ESFRNFGDRK AFICMDKAIS YRELDEMSAA
LGAYLQGKGL QKGARVALMM PNVLQYPVAI AAVLRAGFAV VNVNPLYTPR ELEHQLKDSG
AEAIIVLENF ASTVEQVIAK TAVKQIIVAT MGDMLGFKGV IVNLVVRKVK KMVPAYSLPG
AVPYNDAVAA GRSLKLTKPT LGPDDVAFLQ YTGGTTGVSK GATLLHRNVV ANVLQNDAWL
QPALAKPPHV DQLFIVCALP LYHIFALTAC YLLGMRAGGV NLLIPNPRDM PGFIKELMKY
QVNSFPAVNT LYNGLLHSPG FDKVDFSKLK ISNGGGMAVQ RPVAEAWLKM TGCPIAEGYG
LSETAPVLTC NPATVTEFNG TIGVPVPSTD ISIRDDEGKE VPFGTAGEIC AKGPQVMVGY
WNRPDETALV MTADGYFRTG DVGIMSEDGY TKIVDRKKDM ILVSGFNVYP NEVEEVIASH
PGVMECAVIG VPDKRTSEAV KAFIVKKDPD LTAEDIIKFC HTQLTNYKVP RQIEFRTSLP
KTNVGKILRR ELRDEKKQAA A
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