Gene RPD_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1319 
Symbol 
ID4021796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1482635 
End bp1483744 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID637961512 
Producthypothetical protein 
Protein accessionYP_568458 
Protein GI91975799 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA ATCCGATGAA CATTCCCCCG GTCTCGATCG CTGCAGCGAA GGCGGCGCTG 
ATCGAGCAAT ATGCCGAGCC GACGCTGCGC CGCCGTGCGT CGATGCTGTG GGGGACCCGC
GGGGTTGGAA AGTCGTCGGT CGTGCGCCAG GTCGCCGAGC ACTACAAGGT GCCGCTGGTG
GATCTGCGCC TCACTACGAT CGAGCCGGTC GATATCCGCG GCGCGATCTA CGCGGACGAG
AACCTCGCCA AAACGGTGTG GTTTCCGCCG GAGTTCCTGC CGTCCGCTGA CCAGCCCGAG
GGCCTGCTGT TCCTCGACGA GCTGACCGCC GCCGATCAGC GGCTGCAGAT TTCGGCCTAT
TCGCTGATCC TCGACCGCCG CGTCGGCAAC TACCAACTGC CGGACGGTTG GCTGGTTGTC
GCCGCCGGAA ACGCCAGCTT CCACGGCGCG ATCAGCCACG ATATGGGCAC GGCGCTCGCC
GACCGCATGT TCCACTTCAA CGTGCAGACC GCGATCGACG CCTTCCTCAG CCACGCCATG
GCCCGCGACT TCGCGCCGGA AGTGATGGCC TATCTGAAGA TCCGCCCGGA CAAGCTCGAC
GATACGCAGG CCCAACTCGC CGGCGATCAT CTGATCGGCG CCAGCCCGCG CGGCTGGGAG
GATATCTCCA ACGTGCTGAA GTCGGGACTT TCCGATCAGG CCAAGCGGCT GTTCGTGCAG
GGCCGGATCG GCGCCGCCAA CGCGGCGGAA TTCTTCGGGG TGCTGCGCGA GATCAAGGCC
GGCACCGACG TGGTGCGTCT GCTCGCGGCA CGCCCGGGCC CGGACACCGC AGCGCTTCTC
CCCAAAACCC TCGATGCACT GTACGGCATG CTGTACGGGC TGCTCGCGGC CTGCACCGAT
CAGCCGACGC TGGCGCGCGC GCTCGAAATC ATCGAGCAAC TGCCCGACAT CCGCGGCGCG
GTGCCGCTGC CGATCCGCGA GGCGCAGACG CTGGCGATGG AGCTGTTGAT GCAGCGCGCG
CTGGAGAACG GCCTCGAGGC CGCGATCTTC GACAGCCCGG CCTATGCCCG CTACGGCGAG
CGCCGGCAAA TGGATATGCA GGATGCCTGA
 
Protein sequence
MHGNPMNIPP VSIAAAKAAL IEQYAEPTLR RRASMLWGTR GVGKSSVVRQ VAEHYKVPLV 
DLRLTTIEPV DIRGAIYADE NLAKTVWFPP EFLPSADQPE GLLFLDELTA ADQRLQISAY
SLILDRRVGN YQLPDGWLVV AAGNASFHGA ISHDMGTALA DRMFHFNVQT AIDAFLSHAM
ARDFAPEVMA YLKIRPDKLD DTQAQLAGDH LIGASPRGWE DISNVLKSGL SDQAKRLFVQ
GRIGAANAAE FFGVLREIKA GTDVVRLLAA RPGPDTAALL PKTLDALYGM LYGLLAACTD
QPTLARALEI IEQLPDIRGA VPLPIREAQT LAMELLMQRA LENGLEAAIF DSPAYARYGE
RRQMDMQDA