| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1318 |
|---|
| Symbol | |
|---|
| ID | 4021795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1481266 |
|---|
| End bp | 1482642 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637961511 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568457 |
|---|
| Protein GI | 91975798 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGG CCGCTGCGCT GTATTGCCAT CGCGGAACAC GCGCAATCCA GCGGATGGTG
GAGTTCGCGC CATCCACCGG CGGACTCGCG CTATGGGTGC GGCATCAGGA CCTGCCGGCC
GACAGCGACG TAGCGCCAGT AGCGTTCACC GACGGCACCG TGGTGTATTA CGGCGCGGCG
TTCGAGCGGC TGCCGCTGCC CGAACAGGTC GGGCTCGTCG CCCACGAGGT GCTGCACATC
GCGCTGCGAC ATCCGCAACG CTTCGTCGAG CTGCAGCGCG TGATCGGTGA TGTCGACCTC
GAATTATTCA ACATCTGCGC CGACGCCATC GTCAACTCGA CGCTGGCGCA TCTGAGCTGG
CTGACGCTGC CCGCGAAGTC GGTGATGCTG GAGCAGATCC TCGCCAAGGC GCTCAAGCGC
GAGCAGGAGG CCGAGGCGGC ATTGCTGGAA TGGGATGTCG AGAAGCTGTA TCGCGCGATC
GACGATCGCG ACACCGACAG CAACAACGGC AAGTCGAAGT CCGGCAACAA ATCTCGGGCG
GGCTCCCAGG CCGATGCGTC CGGCTCCGGC GGCCGCGATC AATCCCGGTC GCAATCCAGT
TCTGAACAAC AAAGCGCCGA GCAGCGCGCC GACGGCGCGC GTTCGGCGAA GGTGCGCGAA
CTCGGCGCCG GAGGCGTCCG CGATCTGGTG CCGAACCCGG AATCGCAATC CGCGCCGGAG
CACGAAGCCG AACACGCCCG CGAATGGAGC GAGCGAATCC TGCGCGGCCA CGCCGGCGAC
GGCGCGTTCT CGATGCTGCG CGCGCTGATC GCCGACCTGC CGCACACCCG CACGCCCTGG
GCACAAGTGC TGAGGGTGCA ACTGGCACGC GGCCTGGCAC GAAAGCCGTC ACTGACCTGG
TCGCGGCCGG CGCGCTCCTA CATCGCCAAT CAGGGCCGCG CCGGCCAACA CCGGATGCCG
TTCGAGCCGG GGTTCTGCGC GACCAAGAAC GAGCCGCGGC TGGCGCTGAT TATCGACGTT
TCCGGCTCGA TCGATGAAGG GTTGATGGAA CGGTTCGCGC GCGAGATCGA GACCATCACG
CGGCGGCAGG AAGCGGGGCT GGTGCTGATC ATCGGCGACG AGCGGGTGCG GCAGGTGGAA
TTCTTCGAGC CCGGCCGTCG TTTCGTGCTG AGCGAGATCG AATTCGCCGG CGGCGGCGGC
ACCGACTTCA CCCCCTTGCT CGCCGAAGCC GACCGGCACC GGCCGGACAT CGCCGTGGTG
CTGACCGACC TCGAGGGTCC GGCGGATTTC AAGCCGCGCT GGCCGGTGAT CTGGGCGGTG
CCGGAGAGCC ACGCGAATGC CGTGCAGCCG TTCGGCCGGC TGCTGACCTT GAACTGA
|
|---|
| Protein sequence | MPEAAALYCH RGTRAIQRMV EFAPSTGGLA LWVRHQDLPA DSDVAPVAFT DGTVVYYGAA
FERLPLPEQV GLVAHEVLHI ALRHPQRFVE LQRVIGDVDL ELFNICADAI VNSTLAHLSW
LTLPAKSVML EQILAKALKR EQEAEAALLE WDVEKLYRAI DDRDTDSNNG KSKSGNKSRA
GSQADASGSG GRDQSRSQSS SEQQSAEQRA DGARSAKVRE LGAGGVRDLV PNPESQSAPE
HEAEHAREWS ERILRGHAGD GAFSMLRALI ADLPHTRTPW AQVLRVQLAR GLARKPSLTW
SRPARSYIAN QGRAGQHRMP FEPGFCATKN EPRLALIIDV SGSIDEGLME RFAREIETIT
RRQEAGLVLI IGDERVRQVE FFEPGRRFVL SEIEFAGGGG TDFTPLLAEA DRHRPDIAVV
LTDLEGPADF KPRWPVIWAV PESHANAVQP FGRLLTLN
|
|---|
| |