| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1311 |
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| Symbol | |
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| ID | 4021788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1474831 |
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| End bp | 1475388 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961504 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_568450 |
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| Protein GI | 91975791 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG GCGCTGCTGC CGTCGCCGAG ACACCGCCGC GCGGCAGGCA AGTCCGGGCG
AACAGAGCCA TGAACGATTT TCGCGACGGC GTCGAAGAGT TGATTCCCGC GCTGCGGCGG
TACGCCCGCG CGCTGGCGCG CGACGCCGAT ATTGCGGACG ATCTGGTGCA AGACACGCTG
GTGCGGGCGC TGCGCTCGGA AAAGTTGTTT CACGGCGGCG ATCTGCGGAG CTGGCTCTAT
ACCATTCTGA CCAACCTCAA CCGCAACCGC CGCCGTGCAC TGGCGCGCCG TCCGCCATTG
CTGCCGCTGA ACGACACCGG CGCGGACGCC AGCGGCACCG AAGCGGAGGG CGGCGACATC
GCGCGCGCGC TGGCGACGCT GGTCGAAGAG CAGCGGGCGG TGCTACTACT GGTTGTTCTC
GAGGGGCTTA GCTACCGCGA GATCGCGGAC ATCCAGCGCG TGCCGATCGG CACGGTGATG
TCCCGCCTTG CCCGCGCCCG CGCCCACATC CGCGCCACCC TCGCAGGCGA ACGGCCGATG
CTCAAGCGGG TGAAATGA
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| Protein sequence | MIPGAAAVAE TPPRGRQVRA NRAMNDFRDG VEELIPALRR YARALARDAD IADDLVQDTL
VRALRSEKLF HGGDLRSWLY TILTNLNRNR RRALARRPPL LPLNDTGADA SGTEAEGGDI
ARALATLVEE QRAVLLLVVL EGLSYREIAD IQRVPIGTVM SRLARARAHI RATLAGERPM
LKRVK
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