| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1303 |
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| Symbol | |
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| ID | 4021780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1467464 |
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| End bp | 1469533 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637961496 |
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| Product | cytochrome c1 |
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| Protein accession | YP_568442 |
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| Protein GI | 91975783 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex
[COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAC CCTCGACCTA TCAGCCACAA AGTCCTTGGA TGAAGTGGCT TGAACAGCGC
CTGCCCATCG GGAACTTTGT TCACTCCTCG TTCATTGCGT GGCCGACGCC GCGGAACCTG
AACTACTGGT GGACGTTCGG CGCCATTCTT TCGATGATGC TCGCGCTGCA GATCATCACC
GGCATTGTGT TGGCGATGCA CTACACGCCG CACGTCGACA TGGCCTTCGA CTCGATCGAG
CGCATCGTTC GCGACGTCAA CTACGGCTGG CTGCTGCGCA ACATGCACGC CGCCGGCGCG
TCGATGTTCT TCATCGCGGT CTACATTCAC ATGTTCCGCG GCCTGTATTA CGGGTCGTAC
AAGGCGCCGC GCGAAGTGTT GTGGATCCTC GGCGTGATCA TCTACCTGCT GATGATGGCG
ACCGGTTTCA TGGGCTACGT GCTGCCGTGG GGCCAGATGA GCTTCTGGGG CGCCACCGTG
ATCACCAACC TGTTCTCGGC GATCCCGTTC GTCGGCGACA GCATCGTGAC GCTGCTGTGG
GGCGGCTATT CGGTCGGCAA CCCGACGCTG AATCGCTTCT TCTCGCTGCA CTACCTGCTG
CCCTTCGTGA TCGTCGGCGT CGTCGTGCTG CACATCTGGG CGGTGCACGT CACCGGCCAG
AACAACCCGG CCGGCGTCGA ACCGAAGACC GAGAAGGACA CCGTCCCGTT CACGCCGTAC
GCGACGTTGA AGGACGTGTT CGGCATGTCC TGCTTCCTGA TCTTCTTCTC GTGGTTCATC
TTCTACATGC CGAACTATCT CGGCGAAGCC GACAACTACA TTCCGGCGAA CCCGGGTGTG
ACCCCGCCGC ACATCGTGCC TGAATGGTAC TACCTGCCGT TCTACGCGAT CCTGCGCTCG
ATCCCGGACA AGCTGATGGG CGTCGTTGCG ATGTTCGGCG CGATCATCGT CCTGCTGTTC
CTGCCCTGGC TCGACAGCTC GAAGGTGCGT TCGTCCCGCT ATCGTCCGCT GGCGAAGCGG
TTCTTCTGGG GCTTCGTGGT CTGCTGCCTG GTTCTGGGGT GGCTCGGCTC CAAGCCGGCG
GAAGGCATCT ACACTATGCT TGCCCGCGTC TTCACCTTCT TCTACTTCGC CTACTTCCTG
ATCGTGCTGC CGATGCTGTC ACGGGTCGAG AAGACCCTGC CGCTTCCGAA CTCGATCTCT
GAAGACGTGC TGAACAAGGG CAAGGTGATT GGCACGACGG CGGCGAGCCT GTTCGCCGTG
GTGTTGGCCG GATCCATGAT GTTCGGCGGC GTGCAGAGCG CCAAGGCGGC GGAAGGCGGC
GAGAGCCCGC CCTCGCTGAG CTGGAGTTTT GCTGGCCCGT TCGGCAAGTA CGATCGCGCC
CAATTGCAGC GTGGCTTCAA GGTCTACAAG GAAGTCTGCT CGGCCTGTCA CTCGCTGAAG
TTGCTGCAAT ATCGCAACCT CGCCGAGCCG GGCGGCCCCG GCTTCACCTT GGATCAGGCC
AAAGCGATCG CCGCCGAAGC CTCGATCAAG GACGGCCCCA ACGACGCCGG CGAAATGTTC
GAGCGCCCCG GCCGGCTCGC CGACACCTTC CACTCGCCGT TCCCGAACGA GCAGGCGGCG
CGCGCGGCCA ATGGCGGCGC GGTTCCTCCG GACATGTCGC TGCTCGCCAA GGCTCGCTCC
TATCCGCGTG GCTTCCCGCA GTTCGCGTTC GACCTGTTCA CCCAGTTCCA GGAGCAGGGC
CCGAACTACA TCGACGCGCT GCTGCAGGGC TATCTGGATA CGCCGCCGGA AGGGTTCACG
TTGCCGGACG GGTCGTACTA CAACAAGTGG TTCCCCGGCC ATTCGATCAA GATGCCGCCG
CCGATTTCGG ACGGGCAGGT GACCTATGAC GACGGCAGCC CGCAGACGGT TCAGCAATAC
GCCAAGGACA TCACGTCGTT CCTGATGTGG GCCGCCGAGC CGCATCTCGA AGCCCGCAAG
CGCCTTGGTC TGCAGGTCAT GATCTTCCTG ATCATCCTCA GCGGCCTGCT GTACTTCACC
AAGCGCAAGG TCTGGTCGAA CGCGCACTGA
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| Protein sequence | MSGPSTYQPQ SPWMKWLEQR LPIGNFVHSS FIAWPTPRNL NYWWTFGAIL SMMLALQIIT
GIVLAMHYTP HVDMAFDSIE RIVRDVNYGW LLRNMHAAGA SMFFIAVYIH MFRGLYYGSY
KAPREVLWIL GVIIYLLMMA TGFMGYVLPW GQMSFWGATV ITNLFSAIPF VGDSIVTLLW
GGYSVGNPTL NRFFSLHYLL PFVIVGVVVL HIWAVHVTGQ NNPAGVEPKT EKDTVPFTPY
ATLKDVFGMS CFLIFFSWFI FYMPNYLGEA DNYIPANPGV TPPHIVPEWY YLPFYAILRS
IPDKLMGVVA MFGAIIVLLF LPWLDSSKVR SSRYRPLAKR FFWGFVVCCL VLGWLGSKPA
EGIYTMLARV FTFFYFAYFL IVLPMLSRVE KTLPLPNSIS EDVLNKGKVI GTTAASLFAV
VLAGSMMFGG VQSAKAAEGG ESPPSLSWSF AGPFGKYDRA QLQRGFKVYK EVCSACHSLK
LLQYRNLAEP GGPGFTLDQA KAIAAEASIK DGPNDAGEMF ERPGRLADTF HSPFPNEQAA
RAANGGAVPP DMSLLAKARS YPRGFPQFAF DLFTQFQEQG PNYIDALLQG YLDTPPEGFT
LPDGSYYNKW FPGHSIKMPP PISDGQVTYD DGSPQTVQQY AKDITSFLMW AAEPHLEARK
RLGLQVMIFL IILSGLLYFT KRKVWSNAH
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