| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1299 |
|---|
| Symbol | |
|---|
| ID | 4021776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1464260 |
|---|
| End bp | 1465513 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637961492 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_568438 |
|---|
| Protein GI | 91975779 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG CGGTGCGCGC CGACGCGCCG TGGCTGCATG TCGGCCCGGC TGCCCAGGTT
CTCGCACTGC TCGACGGCCA TGGTGAAGAA GCGCGTGTGG TCGGCGGCGC AGTGCGCAAC
GCGCTGCTGA AGCTGCCGAT CGGCGACGTC GACATCGCCA CCACCGCATT GCCCGAAGAG
GTCGTTCGCC GCGCCAGGGC GGCCGGCATC AAGGCCGTTC CGACCGGAAT CGAGCACGGC
ACCGTGACGC TGGTGCTCGA TGGCCACGGC TTCGAGATCA CCACGCTGCG CGAGGATGTC
GAGACCTTCG GCCGCAAGGC CAAGGTCGCG TTCGGCCGCG ACTGGGTCCG CGACGCCCAG
CGCCGCGACT TCACCATCAA CGGGCTGTCG GTCTCTGCCG ACGGCGTGGT GCATGACCAT
GTCGGCGGCC TCGCCGACAT CGCCGCGCGG CGGGTGCGGT TCATCGGCGA TCCGGATCAG
CGCATCGCCG AGGACTATCT GCGCATCTTG CGGTTCTTCC GCATCCACGC AGCTTACGGC
GTCGGCGCTC CCGAGCGTGA CGGTTATCTG GCCTGTATCC GCGGCCGTGG CGGCTTGTCG
ACGCTGTCGG CCGAGCGGAT GCGGATGGAG ATGCTGAAGC TGATGGTGGC CGGCGGCGCG
GCGGAATCGG TGGTCGCGAT GGCCGATGGC GGCCTGCTGC TCGGGGTGCT GGGCGGCGTG
ATCTATCCTG GAGCTTTCGC GGCGATGGTC GAGGCGGAGC GCGCGCTCGG TCTCGACGCC
GACCCGGTGC GGCGGCTCGG CGCGCTCGCC GTCGCGGTCA CCGAGGACGC CAAGCGGTTG
ACGCAGCGGC TGCGGCTGTC GAACGCGGAG AGCAAGCGGC TCGACTCGAT GGGGCATCGC
TGGTGGCGGC TGGCCCGCAT GGACGAGGCC ACCGCACGCC GCCGGCTGTA TCGCCTCGGG
GAGCCGCGGT TCCACGACAG GATGATGCTG GCCTGGGCGC GGGCAGGGCG TGAGGCCGAT
CCTGCGCCAT GGCGCGACCT GATTGCGTTG CCGCAGCGCT GGCGCGCGCC GGCTTTTCCG
CTGAAAGCCG CCGATTTCAT TGCCCGCGGT TTCGCCGAGG GGCCGGCGCT CGGTCATGTC
CTGACGCTGG CGGAGGACGC CTGGCTCGCC GCGGACTTCC CGGTCGATGA TCAGCGGCTG
CAGGCGATCG CCGATCAGAC CGCGGCGCGG TTCGCGCGCG ATCACCGGCT CTGA
|
|---|
| Protein sequence | MTAAVRADAP WLHVGPAAQV LALLDGHGEE ARVVGGAVRN ALLKLPIGDV DIATTALPEE
VVRRARAAGI KAVPTGIEHG TVTLVLDGHG FEITTLREDV ETFGRKAKVA FGRDWVRDAQ
RRDFTINGLS VSADGVVHDH VGGLADIAAR RVRFIGDPDQ RIAEDYLRIL RFFRIHAAYG
VGAPERDGYL ACIRGRGGLS TLSAERMRME MLKLMVAGGA AESVVAMADG GLLLGVLGGV
IYPGAFAAMV EAERALGLDA DPVRRLGALA VAVTEDAKRL TQRLRLSNAE SKRLDSMGHR
WWRLARMDEA TARRRLYRLG EPRFHDRMML AWARAGREAD PAPWRDLIAL PQRWRAPAFP
LKAADFIARG FAEGPALGHV LTLAEDAWLA ADFPVDDQRL QAIADQTAAR FARDHRL
|
|---|
| |