Gene RPD_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1296 
Symbol 
ID4021773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand+ 
Start bp1462698 
End bp1463309 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID637961489 
Producthypothetical protein 
Protein accessionYP_568435 
Protein GI91975776 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.815141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.662915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC AAGGGCAGAC CGCAAACCAC AGTCTCGACG GATTGACCGA AGCCGCGCGT 
GACGCGGCGG GCCGATCCGC GACCGGCAAG GGCCTGCCGC CGGTGCATCT GTGGAATCCG 
CCGTTCTGCG GCGACCTCGA CATGCGCATT GCGAGCGATG GAACCTGGTT TTATCTCGGC 
ACGCCGATCG GCCGGCCGGC CTTGGTGCGG CTGTTCTCGA CCATCCTCAA GCGCGAGGAT 
GGCAAACACT TTCTGGTGAC ACCGGTCGAG AAGGTCGGCA TCAAGGTCGA TGACGCGCCG 
TTTCTGGCGG TTGAAATGGT CAAGGACGAG GATGCGCTCG GGCGCGTGCT GCGCTTCCGC 
ACCAATGTCG ACGACTGGAT CACGTGCGAC GCGGATCACG GATTGCGATT CGAAACCGCC 
GCCGATGGCG GAATCGTGCC CTATCTGCAC GTCCGCGCCG ACCTCTGGGC CAAGGTGACG 
CGGGCGTTGT ATTACGATCT GGTTGACATC GGCGAGGAGC GGGTGGTCGA TGGTCATCCG 
AAATATGGAA TTGCTTCCGG CGGCGCGTTC TTCGCGATGG CCGACGCGGA GCAGATGAGG 
GAAGCACTTT GA
 
Protein sequence
MAKQGQTANH SLDGLTEAAR DAAGRSATGK GLPPVHLWNP PFCGDLDMRI ASDGTWFYLG 
TPIGRPALVR LFSTILKRED GKHFLVTPVE KVGIKVDDAP FLAVEMVKDE DALGRVLRFR 
TNVDDWITCD ADHGLRFETA ADGGIVPYLH VRADLWAKVT RALYYDLVDI GEERVVDGHP 
KYGIASGGAF FAMADAEQMR EAL