| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1294 |
|---|
| Symbol | |
|---|
| ID | 4021771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1460504 |
|---|
| End bp | 1461442 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637961487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568433 |
|---|
| Protein GI | 91975774 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.457214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.480101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG CGACCGAGCA ACCGAACAAG GAGACGCTTG CAGTCCGACG CGCGGATAGC
GAAAGCCGCA CGCTCGCCGC GTCACTGCCG CGGCTGATGC TCGAAGCCCG CCGGATCGCC
AACAACGTCA CCCATGGCCT GCACGGCCGC CGCCGCGCCG GCGCCGGCGA GAATTTCTGG
CAGTATCGCC GCTTCGTGTC CGGCGAGCCG GCGCAAAACG TCGACTGGCG GCGCTCGGCG
CGCGACGATC ATCTCTACGT CCGCGAACTG GAATGGGAGG CGGCGCATAC GGTGTGGCTG
TGGCCGGACC GTTCGGCCTC GATGGCCTAC GCCTCGAAGG GCGTGCGCGA CAGCAAGCTC
GAGCGCGCGC TGATCGTCAC CTTCGCGCTG GCTGAGCTGC TGGTCGCTGG CGGCGAGCGG
GTCGGCATTC CCGGGCTGAT GAACCCGACG TCGAACAACA ACGTGATCGA CCGGATGGCG
CAGGCGATCC TGCACGACAC CCGTTCGCGC GACAGTCTGC CGCCGTCCTT CGCGCCGTCG
TCGCTGGCCG AAATCGTGGT GCTGTCGGAC TTCTGGTCGC CGATCGGCGA GATCCGGCAG
ATGCTCGCCG GGCTGTCCTC GTCCGGCGCG CACGGCACCC TGGTGCAGGT TGTCGATCCT
GCGGAAGAGA GCTTTCCGTT CTCCGGCCGT GTCGAATTCG TCGAGCCCGA AGGCGGCGGC
GCGATCACCG CCGGCCGCGC CGAGACCTGG GCGGCCGATT ATGTGGCGCT GGTGGCGGCG
CATCGCGACC AGATCCGGAT CGAAACCGGC AAGCTCGACT GGCTGTTTTC GACTCACACC
ACCAGCCGCT CGGCCGCTGA GCTGCTGCTG TTCCTGCACG CCGGAATGAC CTCAGCCAAG
GGCGTCGAAC GCGGCGCCAA AGCGGGGCTC GGCGCATGA
|
|---|
| Protein sequence | MAQATEQPNK ETLAVRRADS ESRTLAASLP RLMLEARRIA NNVTHGLHGR RRAGAGENFW
QYRRFVSGEP AQNVDWRRSA RDDHLYVREL EWEAAHTVWL WPDRSASMAY ASKGVRDSKL
ERALIVTFAL AELLVAGGER VGIPGLMNPT SNNNVIDRMA QAILHDTRSR DSLPPSFAPS
SLAEIVVLSD FWSPIGEIRQ MLAGLSSSGA HGTLVQVVDP AEESFPFSGR VEFVEPEGGG
AITAGRAETW AADYVALVAA HRDQIRIETG KLDWLFSTHT TSRSAAELLL FLHAGMTSAK
GVERGAKAGL GA
|
|---|
| |