Gene RPD_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1290 
Symbol 
ID4021767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1454653 
End bp1454856 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content62% 
IMG OID637961483 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_568429 
Protein GI91975770 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.283342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA TCACCGTCAA CATGGCTGCC GGCCGCACCG ACGAGCAGAA GGCGGCGATG 
ATGCGCGACA TCACCCAGGC GCTGGTGACG CATCTCGGCG TCGATGCCGA GGCCGTGGTG
ATTCAGATCA ACGAAGCGCC GCTCAGCAAC AAGATGAAGG GTGGCAAGAC CTTCATCGAA
CGCAAGGCCG AGCAGGGCAA GTAA
 
Protein sequence
MPEITVNMAA GRTDEQKAAM MRDITQALVT HLGVDAEAVV IQINEAPLSN KMKGGKTFIE 
RKAEQGK