| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1289 |
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| Symbol | hisS |
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| ID | 4021766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1452863 |
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| End bp | 1454458 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637961482 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_568428 |
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| Protein GI | 91975769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.219331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AACCGAAGAA AACGCAGAAA CTCCGCGCCC GGCTGCCGCG CGGGCTGGCC
GACCGCGGCC CCGCCGAGAT CGCGGCGACG CGGTCGATGG TCGAGATCAT CCGCGAGGTC
TATGAGCGCT ACGGCTTCGA GCCGGTCGAG ACCCCGGCGT TCGAATACAC CGACGCCCTC
GGCAAGTTCC TGCCCGACCA GGACCGCCCC AACGAGGGCG TTTTCTCGCT GCAGGACGAC
GACGAGCAGT GGATCAGCCT GCGCTACGAC CTGACCGCGC CGCTCGCCCG CTACGTCGCG
GAGAATTTTG ATGCACTGCC GAAGCCGTAT CGCAGCTACC GCTTCGGCTG GGTGTTCCGC
AACGAAAAGC CCGGTCCCGG CCGCTTCCGC CAGTTCATGC AGTTCGACGC CGACACCGTG
GGCGCGCCGA CCGCCGCCGC CGACGCCGAG ATGTGCATGA TGGCGGCGGA CACCATGGAA
GCGCTGGGCA TTCCGCGCGG CAGCTATGTG GTGAAGGTGA ATAACCGCAA GGTGCTTGAT
GGCGTGCTGG AGGCCATTGG GCTTGGCGGC GAAGAAAATG CTGGTCGCAG GCTGACCGTT
CTGAGGGCCA TCGATAAGCT GGACAAGTTT CCGATCACGG AAATCGAGAA GCTACTCGGA
AACGGTCGGT GGGATGGTGG TGAGGAAGGC AAAGGTGACT TCACTAAAGG CGCTGGCCTG
ACTGAAGAGC AGATGCTGCG CATCTTCAAT TATGTTTCGT TTGGGGCTGT GCTTTCTACC
TCGCCAGGTG ACTCAAATTT TGCCGGCTCG ATACAGAATC GCAATCCGAG CGAACTGCGT
CGGTCGAACG AAGAGGTGGT ATCTGGACTC AAAGACTCTT TCGGGGACTC GCCGATCGCA
CAGCAAGGGC TAGATGAGCT TGGCGAGATA GCTCGGCTTG CGACTGCGGG AGGATATGAT
CAGATGAGAA TTCTCATCGA CCCTTCCGTC GTCCGCGGCC TCGAATACTA CACCGGTCCG
GTCTACGAGG TCGAACTGCT GCTCGACACC AAGGACGACA AGGGCCGACC GATTCGGTTC
GGCTCGGTCG GCGGCGGCGG GCGTTATGAT GGTCTGGTGT CGCGTTTCCG CGGCGAGCCG
GTGCCGGCGA CCGGGTTCTC GATCGGCGTG TCGCGGCTGC AGGCGGCGCT GGAGATCGTC
AACCGGGACA AGCCGAAACA GCCGAGCTAC GGCCCCGTCG TCGTCACCGT GTTCGGCGGC
GATATCGCCG GCTATCAAAA AATGGTGTCG ACGCTGCGCC AGGCCGGCAT TCGCGCCGAA
TTGTATCTCG GCAATCCGAA GCACTCGCTC GGCCAGCAGA TGAAATACGC CGACAAGCGC
AACTCGCCCT GCGCCATCAT TCAGGGCTCC GACGAGAAAG AGCGTGGCGA AGTTCAGATC
AAGGACCTGA TCCTCGGTGC CGAACTGGCG TCGCTGGAGA AGGATCGTGA GGAGTATCTG
AAGAAACAGG CCGATGCGCA GTTCTCCTGC GGCGTGGATG ACCTCGTCGC CAAGGTCCGC
GATGTGCTGG CGCGGCACAG CGTGAAGTGG AGTTAG
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| Protein sequence | MAEKPKKTQK LRARLPRGLA DRGPAEIAAT RSMVEIIREV YERYGFEPVE TPAFEYTDAL
GKFLPDQDRP NEGVFSLQDD DEQWISLRYD LTAPLARYVA ENFDALPKPY RSYRFGWVFR
NEKPGPGRFR QFMQFDADTV GAPTAAADAE MCMMAADTME ALGIPRGSYV VKVNNRKVLD
GVLEAIGLGG EENAGRRLTV LRAIDKLDKF PITEIEKLLG NGRWDGGEEG KGDFTKGAGL
TEEQMLRIFN YVSFGAVLST SPGDSNFAGS IQNRNPSELR RSNEEVVSGL KDSFGDSPIA
QQGLDELGEI ARLATAGGYD QMRILIDPSV VRGLEYYTGP VYEVELLLDT KDDKGRPIRF
GSVGGGGRYD GLVSRFRGEP VPATGFSIGV SRLQAALEIV NRDKPKQPSY GPVVVTVFGG
DIAGYQKMVS TLRQAGIRAE LYLGNPKHSL GQQMKYADKR NSPCAIIQGS DEKERGEVQI
KDLILGAELA SLEKDREEYL KKQADAQFSC GVDDLVAKVR DVLARHSVKW S
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