| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1287 |
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| Symbol | |
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| ID | 4021764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1449730 |
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| End bp | 1451202 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961480 |
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| Product | putative cylclic diguanylate phosphodiesterase |
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| Protein accession | YP_568426 |
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| Protein GI | 91975767 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.437455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0664997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAA TCTCGACCAT TTTCATTGCC ATCTGCATGG TACTGGTCTC CGTGTCGCTC
GGCACGGTGG TGTATTCGCT CGCCGGGTTC AGCGCGGGCG AATCCGCGAT CGTCGCGCTC
GCGACGCTGA CCTTCTTCGT TCTTTACAGC GCCGTGTCGA TGCGGCTCAG CGACCGCGCC
GACCCCAGTC ACCAGATCGC CGACCTGTCA CGCGGCACCG CCGACCTTGC CCGCCAGATC
GCCGAATTCG GCCGCCGGCT CGCCGTTGTC GAGGGCAAGG TGGTCGCCGC CAATGCGACC
AATCAAGACC GCATCCAGGT CGCGATGGGT GAGATCGGCG AGCTCGGGCT GCTGGTGAAG
CAGCTCGCCG CCTCGGTCGC GACCCACGAG GACATGCTGG CCGGAGCCGC GCCAGGCGCG
CCGCCGCGGC GAACTCCGTT GCTCGATCCG GAAGCGCCGG TGCAGATCCA GCAGATCGCC
GACAATCAGG CCGAACAGCC CGGGGCAACG GACGTCGTTC CCGCTCCCGC CGCGCCGTCG
TCGCTCCCGC CCCAGCCGGC GCGCGATCCG GCACAAATCC TGACCGCGGT GAAGAACGCC
GTCGAGGCTG GTCGGCTCGA CATCTATCTG CAGCCGCTGG TGACGCTGCC GCAGCGCAAG
GTGCGCTTCT ACGAGATCGT GACCCGGTTG CGCGACGGCA AGGATCAGGT TCTGACCGCC
GACGAGTTTC TCCCCGTCGC AGAATCCGCC GGGATGATGG GCCGCATCGA TCACGAGGTG
ATGCTGCGCG CGATCCAGGT GCTGCGCCGC CTGATGGTGC GCAACAAGGA GGTCGGCGTG
TTCGTCAATG TCGCGGGAGC GACGCTGTCG AACGCCGATG CGTTTTCGCA ATGTCTCGAT
TTTCTCGAGG CCAACCGGGC GCTGGCGCCG TCTTTCGTGC TGGAATTCAA GCAAAGCACG
CTGCGCAACC TCGGGCCGCG CGAGAGCGAG CACCTCGCGG CGCTGGCGCA GCGGGGCTTC
CGGTTCTCGA TCGACCACGT CACCGACCTG CGGTTCGAGC CGCGCGAACT CGCCGATCGC
GGCGTGCGCT TCATCAAGGT GCCGGCGTCG CTGCTGCTCG ACCAGCGCGA GCATCCGGCG
GCCGACATCC ACCCCGCGGA TCTGTCCGAC CTGCTCGGCA GGTTCGGCAT CGACCTGATC
GCCGAGCGGA TCGAGGGTGA GCGCGCGGTG GTCGACCTGC TTGACTACGA TGTGAGGTTT
GGGCAGGGGT TCTTGTTCGC AGCGCCCCGG CCGCTGCGAC CCGAGACCGC CCCATCGCCT
GCGCCGATAT CTTCCGGCGA CAAGGCCAAG CAGGACACCG CCCCTCCGCA TGATCCCAGC
CCCTCCCCGA AGGGCGAACT CGCCCGGATC GATCCGCCGC GCGCCGCCAC TGGCGTCGCC
GCTCTGGCGC GCCGCGCCGT CGGCCCGGTC TGA
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| Protein sequence | MFRISTIFIA ICMVLVSVSL GTVVYSLAGF SAGESAIVAL ATLTFFVLYS AVSMRLSDRA
DPSHQIADLS RGTADLARQI AEFGRRLAVV EGKVVAANAT NQDRIQVAMG EIGELGLLVK
QLAASVATHE DMLAGAAPGA PPRRTPLLDP EAPVQIQQIA DNQAEQPGAT DVVPAPAAPS
SLPPQPARDP AQILTAVKNA VEAGRLDIYL QPLVTLPQRK VRFYEIVTRL RDGKDQVLTA
DEFLPVAESA GMMGRIDHEV MLRAIQVLRR LMVRNKEVGV FVNVAGATLS NADAFSQCLD
FLEANRALAP SFVLEFKQST LRNLGPRESE HLAALAQRGF RFSIDHVTDL RFEPRELADR
GVRFIKVPAS LLLDQREHPA ADIHPADLSD LLGRFGIDLI AERIEGERAV VDLLDYDVRF
GQGFLFAAPR PLRPETAPSP APISSGDKAK QDTAPPHDPS PSPKGELARI DPPRAATGVA
ALARRAVGPV
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