| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1286 |
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| Symbol | |
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| ID | 4021763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1448863 |
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| End bp | 1449717 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961479 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_568425 |
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| Protein GI | 91975766 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.268881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0567412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC TTCGTTTCGT CGATCACCTG CGCGAACTGA TGGGCTCTGT CGATGTCGTG
TTGAGCGACA TCTGGGGCGT GGTCCATAAC GGCCTGGAAT CGTTTCCAGA GGCTTGCGAC
GCGCTGCGCA CCGCGCGCAA CGAAGGCCGC ACTGTGGTGC TGATCACCAA TGCACCGCGC
CCGGCCGACT CGGTGCAACG CCAGCTCCGC AAGCTGCACG TGCCCGACGA TTGCTACGAC
GCCATCGTCT CATCCGGCGA CCTCACGCGC GCTTACGTCG CCGAGCACCC CGGTCAGTCG
GTGTTCTGGC TCGGCCCGGA TCGCGACAAT TCGATCTATC GCGGCCTCGA TGCTGTCCTG
ACGCCGCTGG ACCAGGCCGA CTACATCATC TGCACCGGCC CGTTCGACGA CGAGACCGAG
TCGGCCGAGG ACTATCGCGA GATGATGGGC GAAGCGCTGC AGCGCAAGCT GAGGCTGATC
TGCGCCAACC CCGACATCGT GGTCGAGCGC GGCGACCGGC TGATCTATTG CGCCGGCGCG
ATCGCCGAAC TCTATCGCGA ACTCGGCGGC GACGTCATTT TCTATGGCAA GCCGCATCGG
CCGATCTACG ACCGCGCCAT GGCGATCGCG CGTGAGCTGC GCAACGCCGA GACGCCGTTG
CAGCGCGTGC TGGCGATCGG CGACTCGGTG CGCACGGACC TTGCCGGCGC GCAGAGCTAC
GGCATCGATC TGCTGTTCGT CACCCGCGGC ATCCATTCCG ACGCCTTCGA GGGCATCGAC
CGCCTGGATA CCGACGCTGT CAGCGAACTG TTCGGCCACC CGCCGCTGGC GCTGACCCGC
GAATTACGGT GGTAA
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| Protein sequence | MTTLRFVDHL RELMGSVDVV LSDIWGVVHN GLESFPEACD ALRTARNEGR TVVLITNAPR
PADSVQRQLR KLHVPDDCYD AIVSSGDLTR AYVAEHPGQS VFWLGPDRDN SIYRGLDAVL
TPLDQADYII CTGPFDDETE SAEDYREMMG EALQRKLRLI CANPDIVVER GDRLIYCAGA
IAELYRELGG DVIFYGKPHR PIYDRAMAIA RELRNAETPL QRVLAIGDSV RTDLAGAQSY
GIDLLFVTRG IHSDAFEGID RLDTDAVSEL FGHPPLALTR ELRW
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