Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1285 |
Symbol | |
ID | 4021762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1448264 |
End bp | 1448659 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637961478 |
Product | response regulator receiver |
Protein accession | YP_568424 |
Protein GI | 91975765 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0521811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTG ATTTGTCAAT GTCGGTCCTG GTGGTGGACG ACTACAGCAC CATGATCCGG ATCATTCGTA ATCTTCTGAA GCAACTCGGC TTCGAGCATA TCGACGATGC CAGCGACGGC TCGGCGGCGC TCGAAAAGAT GCGCGTCAAG AAGTACGGTC TGGTGATCTC GGACTGGAAC ATGGAGCCGA TGACGGGCTA CGACCTGCTG AAGGAAGTTC GCGCCGACCC GAACCTGTCG CAGACGCCAT TCATCATGAT CACCGCGGAA TCCAAGACCG AGAACGTGAT CGCCGCCAAG AAGGCGGGTG TGAACAACTA CATCGTCAAG CCGTTCAACG CCGCGACCCT GAAGACGAAG ATCGAGGCGG TATTCCCGGA TCACGTCGCG GCGTAA
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Protein sequence | MAVDLSMSVL VVDDYSTMIR IIRNLLKQLG FEHIDDASDG SAALEKMRVK KYGLVISDWN MEPMTGYDLL KEVRADPNLS QTPFIMITAE SKTENVIAAK KAGVNNYIVK PFNAATLKTK IEAVFPDHVA A
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