Gene RPD_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1285 
Symbol 
ID4021762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1448264 
End bp1448659 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content57% 
IMG OID637961478 
Productresponse regulator receiver 
Protein accessionYP_568424 
Protein GI91975765 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0521811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG ATTTGTCAAT GTCGGTCCTG GTGGTGGACG ACTACAGCAC CATGATCCGG 
ATCATTCGTA ATCTTCTGAA GCAACTCGGC TTCGAGCATA TCGACGATGC CAGCGACGGC
TCGGCGGCGC TCGAAAAGAT GCGCGTCAAG AAGTACGGTC TGGTGATCTC GGACTGGAAC
ATGGAGCCGA TGACGGGCTA CGACCTGCTG AAGGAAGTTC GCGCCGACCC GAACCTGTCG
CAGACGCCAT TCATCATGAT CACCGCGGAA TCCAAGACCG AGAACGTGAT CGCCGCCAAG
AAGGCGGGTG TGAACAACTA CATCGTCAAG CCGTTCAACG CCGCGACCCT GAAGACGAAG
ATCGAGGCGG TATTCCCGGA TCACGTCGCG GCGTAA
 
Protein sequence
MAVDLSMSVL VVDDYSTMIR IIRNLLKQLG FEHIDDASDG SAALEKMRVK KYGLVISDWN 
MEPMTGYDLL KEVRADPNLS QTPFIMITAE SKTENVIAAK KAGVNNYIVK PFNAATLKTK
IEAVFPDHVA A