| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1281 |
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| Symbol | uvrC |
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| ID | 4021758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1443237 |
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| End bp | 1445324 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961474 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_568420 |
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| Protein GI | 91975761 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.280524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.136737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG ACCCCGCCGA GACCCGCGAC ACGGCGGCCC CGCCGCCCGC GGACACCACA
TCCCCATCGC CCGTCTCACC TGAATTGGAG CCCCGCTCCG CGCCCGGCGC GCAGGACATT
GACGCCGCAT CCGCCTCGCT GACGGTGGAT GAGGACGACG AGGCGCGCCT GCCGGAGATC
GACGACGATA GCGCCGAGGT CGCCGACGGA CCGCTCGCGG TCGGCCGCGC CGCGATCGAG
CAGGCGGTTC GGCTGGCGCC GACCTCCCCC GGGGTCTACC GGATGCTGAA TGCCGCCGAC
GACGTGCTCT ATGTCGGCAA GGCAAAGAAC GTAAAGAAGC GGCTGTCGTC CTATGCGCGG
CCGACCGGGC ACGTCGTCCG GATCGCGCGG ATGATCGCCG CGACCGTGAC AGTCGAGATC
ATCTCGACGG CGACCGAGAC CGAGGCGCTG CTGCTCGAAG CCAATCTGAT CAAGCAGCTC
CGGCCGCGCT TCAACGTGCT GCTGCGCGAC GACAAGTCGT TCCCCTATAT CCTGATCACC
GGCGACCATT GGGCGCCTCA GATCCTCAAG CATCGCGGCG CACAGAGCCG CCCGGGGCGC
TATTTCGGCC CGTTCGCCTC GGTCGGCGCG GTCAACCGCA CCATCACCGC GCTGCAGCGC
GCGTTCCTGG TGCGCTCCTG TACCGACTCG TTCTTCGAGA GCCGCACCCG GCCGTGCCTT
TTGTATCAAA TCCGGCGCTG CGCCGGCCCC TGCACCGGCG AGGTCGATTT TCCCGGCTAT
ACCGAGCTGG TGCGCGAGGC GACCGACTTT CTGTCCGGCC GCAGCCGGGC GGTGAAGCAG
GAACTTGCCG TCGAAATGGA GAAGGCGTCG AACGAGCTCG AATTCGAGAC CGCGGCGCTA
TATCGCGACC GCCTTGCCGC GCTGTCGGCG ATCCAGTCCC AGCAGGGCAT CAATCCGCGC
ACCGTCGAGG AAGCCGACGT GTTCGCGATC CATCAGGAGG GCGGCTATTC CTGCGTCGAG
GTGTTCTTCT TCCGCACCGG CCAGAACTGG GGCAACCGCG CCTACTTCCC GCGCGCCGAG
AAGTCGTTCA CGCCGGAGGA GGTGCTGGCG TCGTTCCTGG CGCAATTCTA CGACGACAAG
CCGCCGCCCA AGCTGATCCT GCTGTCGCAC GATATCGAGG AGTGCGAACT TTTGGCCAAC
GCGCTGTGCA TCAAGGCCGG CCGCAAGGTC GAGGTCGCGG CGCCGAAGCG CGGCGAGAAG
AAGGAGCTGG TCGCGCACGC GCTCACCAAC GCCCGCGAGG CGCTCGGCCG CAAGCTCGCC
GACACCGCGA CCCAGACCCG ACTGATGCAG GGGCTCGCCA CGACACTGGG CCTGCCGAGG
CCGCCGCAGC GGATCGAGGT CTACGACAAC AGCCACATTC AGGGCACCAA CGCGGTCGGC
GCGATGATCG TCGCCGGCCC GGACGGCTTC ATCAAGAACC AGTACCGCAA ATTCAACATC
CGCTCCGAAG GCCTCACCCC GGGCGACGAC TATGCGATGA TGCGCGAGGT GTTGCAGCGC
CGGTTCAAGC GGCTGGCGGC CGCGAAGGCC GAAGGCGATG CGGCGAAGCC GAAGGAGGAC
GATACCCCGC TATGGCCCGA CCTCGTGATC ATCGACGGCG GCCGCGGCCA ACTCAACGCC
GCGCGCGGGG TGCTGACCGA ACTCGGCCTC GGGGCGGAGG TGACGCTGCT CGGCGTCGCC
AAGGGACCGG ACCGCGACGC CGGCCGCGAG ACGCTGTTCA TGCCGGAGCG CGAGGCAATC
AAGCTCGAGC CGCGCGACCC GGTGCTGTAT TTCATCCAGC GGCTGCGCGA CGAAGCGCAT
CGCTTCGTGA TCGGCTCGCA CCGCAAGCTG CGCAAGAAGG ACATCCGCGA GGCCGGATTG
CAGGAGATTC CCGGCATCGG CCCGACGCGC AAGCGCGCAT TGCTCCACCA TTTCGGCACC
TTGAAGGAGA TCGAACGCGC CTCGATCGGC GACCTTGGCA AGGTTCCGGG CATCAGTGCC
GAGAGTGCCC GGCGGATTTT CGATTTCTTC CATCCGGGTC CGGGCTGA
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| Protein sequence | MNQDPAETRD TAAPPPADTT SPSPVSPELE PRSAPGAQDI DAASASLTVD EDDEARLPEI
DDDSAEVADG PLAVGRAAIE QAVRLAPTSP GVYRMLNAAD DVLYVGKAKN VKKRLSSYAR
PTGHVVRIAR MIAATVTVEI ISTATETEAL LLEANLIKQL RPRFNVLLRD DKSFPYILIT
GDHWAPQILK HRGAQSRPGR YFGPFASVGA VNRTITALQR AFLVRSCTDS FFESRTRPCL
LYQIRRCAGP CTGEVDFPGY TELVREATDF LSGRSRAVKQ ELAVEMEKAS NELEFETAAL
YRDRLAALSA IQSQQGINPR TVEEADVFAI HQEGGYSCVE VFFFRTGQNW GNRAYFPRAE
KSFTPEEVLA SFLAQFYDDK PPPKLILLSH DIEECELLAN ALCIKAGRKV EVAAPKRGEK
KELVAHALTN AREALGRKLA DTATQTRLMQ GLATTLGLPR PPQRIEVYDN SHIQGTNAVG
AMIVAGPDGF IKNQYRKFNI RSEGLTPGDD YAMMREVLQR RFKRLAAAKA EGDAAKPKED
DTPLWPDLVI IDGGRGQLNA ARGVLTELGL GAEVTLLGVA KGPDRDAGRE TLFMPEREAI
KLEPRDPVLY FIQRLRDEAH RFVIGSHRKL RKKDIREAGL QEIPGIGPTR KRALLHHFGT
LKEIERASIG DLGKVPGISA ESARRIFDFF HPGPG
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