Gene RPD_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1279 
Symbol 
ID4021756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1442229 
End bp1442480 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content67% 
IMG OID637961472 
Productmolybdopterin converting factor, subunit 1 
Protein accessionYP_568418 
Protein GI91975759 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID[TIGR01682] molybdopterin converting factor, subunit 1, non-archaeal 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.287689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.255323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGA AGTATTTCGC CTGGGTCCGC GAACGCATCG GCCTCGACGA GGAAACCATC 
GAACCGCCGG CCGACATCGC AACCGTCGCC GATCTGATCG GCTGGCTGTC GGCGCGCGGC
GAAGGCTATG CTGCGGCGTT CGAGAAGCCG ACGGTGATCC GCACCGCGAT CGACCGCACC
CATGTCCGCC CGGAGACGCC GATCAAGGGC GCCCGCGAAG TCGCCTTTTT CCCGCCAATG
ACCGGCGGCT GA
 
Protein sequence
MRVKYFAWVR ERIGLDEETI EPPADIATVA DLIGWLSARG EGYAAAFEKP TVIRTAIDRT 
HVRPETPIKG AREVAFFPPM TGG