| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1266 |
|---|
| Symbol | |
|---|
| ID | 4021743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1426939 |
|---|
| End bp | 1427832 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637961459 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568405 |
|---|
| Protein GI | 91975746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.649743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG GCGCGGCCTC ACACCCACTA GAACGAACAG CGATGGCGCG CAGATTTTCC
GCTCCCTATC AGATGGAGCC CGTATCGCGC CTCGCCAGCT GGGCGCGTAT GCTGGCGGTG
TTCGCGGCCA TCGCGGCCGT GGTCTCGACC CTTGTGGTTC GGTTCGACTT CCTCGAAGTC
CGCCCGGCGA TGGCGACGTT CTTCGGCGCG CTGGCGCTGG CCGGGCTCTC GATCGTGCTG
GCGCTGGCCG GCTTCGCTGC GATCTGGCAG AACGGCTCGC GCGGCATGGC GCGCATCCTG
CTGGCGCTGT TGATCGACGT CCTGATCCTC GCCTACCCGT CTTATCTCGG CTGGCAGTAT
CGCACGCTGC CCGCGATCCA CGACATCACC ACCGACGCGA TCGACCCGCC GAAATTCGAG
ACGCTGGCGC GGCTGCGGGT CGGCGACGGC GCCAACACCG CGGTCTATGC TGGCCTGTAC
TCCGCCGAGC TGCAGCACAC GGCCTACCCG GCGATCGAGA CCGTGCAGGT CGATCTGCCG
GTGCAGCGCG CCTATGAGCT GGCGCTGAAT CTGGTCAACC GCCGCAAATG GCGGGTGGTC
GATGCGCGGC CGCCGCAGCT GCCGCGGCGC GAGGGGCATA TCGAGGCGGT CGCGCGCACC
ATGGTGATGG GCCTGCCCGA AGACGTCGCG ATCCGCATCC TGCCGGACGG CGACGGCGCC
AGGATCGATA TCCGCTCCGC CTCGCGCTAC TTCGAAAGCG ACCTCGGCAG CAACGCCGCG
CGCATCGCCA AGCTCAGCGA AGACATCACC ACCGCCGCCG AGAACGCGCC GACGCCAAAG
CCCGACCCGG CCGCAAAGCA GCCGGCGAAG GGCAAGGCGG CGCCGAAGAA GTAG
|
|---|
| Protein sequence | MAAGAASHPL ERTAMARRFS APYQMEPVSR LASWARMLAV FAAIAAVVST LVVRFDFLEV
RPAMATFFGA LALAGLSIVL ALAGFAAIWQ NGSRGMARIL LALLIDVLIL AYPSYLGWQY
RTLPAIHDIT TDAIDPPKFE TLARLRVGDG ANTAVYAGLY SAELQHTAYP AIETVQVDLP
VQRAYELALN LVNRRKWRVV DARPPQLPRR EGHIEAVART MVMGLPEDVA IRILPDGDGA
RIDIRSASRY FESDLGSNAA RIAKLSEDIT TAAENAPTPK PDPAAKQPAK GKAAPKK
|
|---|
| |