Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1265 |
Symbol | |
ID | 4021742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1425749 |
End bp | 1426681 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961458 |
Product | beta-lactamase-like |
Protein accession | YP_568404 |
Protein GI | 91975745 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.581191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.66012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CCAGTGCCAA CCCCGACGAC GTTCCGTTCA ACCGCGATTT TCCGCTGAAA CCGGGCGTCG TCGAGGAGGT CCGCCCCGGC CTGCGCCGCG TGCTGTGCGA CAACCCTTCG CCCTTCACCT TCACCGGCAC GGTCAGCTAC ATCGTGGGTA CCGGCAAGGT GGCGATCATC GATCCCGGCC CCGACAGCGA GGCGCATGCG AATGCGCTGA TCGATGCGGT GAAGGGCGAG ACCGTCACCC ACATCCTCGT CACCCACACC CACAAGGATC ATTCGCCCGG CACGCCGCGG CTCAAGGCCG CGACCGGCGC GACGGTTTAT GCCGAAGGCC CGCACCGCGC CTCGCGGCCG TATTTCGAGA GCGAGAAGGT CTCGACCGAA TCCGGCGCCG ACCGCAATTT CAAACCCGAC GTCGCGATCC GCGACGGCGA TGTGATCGAA GGCGACGGCT GGACGGTGGA AGCGGTGGCG ACGCCGGGGC ACACCGCCAA CCACATGGCG TTCGCCTGCC GCGAGCGCGA CGCGCTGTTC GTCGGCGACC ACATCATGGG CTGGTCGACC TCGATCGTGG CGCCGCCGGA CGGCTCGATG GTCGATTACA TGAATTCGAT CGACCGTCTG ATCGCGCGCT CCGAGCAGCT CTATCTGTCC GGCCACGGCG CCGAGATCCT CGAAGGCCCG CGCTACTCGC ACTTCCTGAA GCGCCATCGC CTCGCCCGCG AAGCCTCGAT CCTGTACCGG CTGGCGAAAG GCGAGACCGA CATCCCGACG ATTGTGCGCG CGATCTATAT CGGCATCGAC CCGCGGCTGA TGACCGCCGC CGGCTATTCC GTGCTGGCGC ATCTCGAAGA TCTGGTGTTG CGCGGCATCG TCGCGACGGA GGGCGACCCG GTGATCGGCG GGCGCTACCG GCTGGCGAAG TAA
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Protein sequence | MSDASANPDD VPFNRDFPLK PGVVEEVRPG LRRVLCDNPS PFTFTGTVSY IVGTGKVAII DPGPDSEAHA NALIDAVKGE TVTHILVTHT HKDHSPGTPR LKAATGATVY AEGPHRASRP YFESEKVSTE SGADRNFKPD VAIRDGDVIE GDGWTVEAVA TPGHTANHMA FACRERDALF VGDHIMGWST SIVAPPDGSM VDYMNSIDRL IARSEQLYLS GHGAEILEGP RYSHFLKRHR LAREASILYR LAKGETDIPT IVRAIYIGID PRLMTAAGYS VLAHLEDLVL RGIVATEGDP VIGGRYRLAK
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