Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1254 |
Symbol | |
ID | 4021731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1416245 |
End bp | 1417528 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961447 |
Product | ABC-type branched-chain amino acid transport systems, periplasmic component |
Protein accession | YP_568393 |
Protein GI | 91975734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.946675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGAA CTTATCGCAT GGCGGTGATC GGGCGGTTGA CGACGGTGGC GCTCTGGGCA GGTCTCGGTG TTGCAAGTCT GGGTGTTACA AGTCTCGGCG TTGCAGGTCT GGGCATCGGC GGGGCTGCGG CGCAGCAGTC CGCCGACACC TCGCCGGTGC GGATCGGCGT GCTCACCGAC ATGTCGGGGC TGTTCGCCGA CATCTCCGGC CACGGTGCGG TGATCGCCGT CAAAATGGCG GTCGATGATT TCGGCGGCAA GGTGCTCGGG CGTCCGATCG AGGTTCTCTC CGCCGACCAC CAGAACAAGG CCGACGTCGG CCTGTCGCTG GCGCGCGCGT GGATCGACGA GAAGAACGTG GTGATGCTGG CTGACCTGAT GAATTCCTCG GTCGCGCTCG GCGTCATGGA ACTCACCAGG AACAAGGACC GGATCGCCAT CGTCAACGGC GCCAGCACCT CGGTGATCAC CAACGAGAAG TGCACGCCGA ACAGCATCCA CTACACCTGG GACACCTATG CGCTCGCCCG CGGCACGGCC AATGCGGTGG TCAACCGCGG CAAGAAGAAG TGGGCGCTGC TCGAAGCCGA TTTCGCATAT GGCCACCAGC TCGCCAATGA CAGCCGCCGC TTCGTCGAAG CCGCCGGCGG CGCGGTCGTC TCGGAGATCA AGCACCCGAT CAACACCAGC GACTTCTCCT CCTTCCTGCT CCAGGCGCAG AGCTCCGGCG CGGACGTGAT CGCGCTGGCC AATGGCGGGG CCGATACCAT CAATTCGATC AAGTCGGCGG CCGAGTTCGG CATCGGCCGC GGCGGCAAGC AACAGGTGGT CGGGCTCGCG ATCAACCTCA ACGACACCAA GGCGCTCGGC CTCGACGCCG CGCAGGGACT GCTGCTGACC GAAGCGTTCT ACTGGGATCG CAACGACGAG ACCCGCGCCT GGTCGAAGCG CTTCCTGGAG AAGTTCGGCA AGATGCCGAC CTCGACCCAG GCCGGCGACT ACTCGTCGAC GATGCACTAC CTCAAGGCGG TCGCCGCCGC CGGCACGCTC GATGCGCAGA CGGTGATGGC CAAGATGCGC GACACCCCGG TCGACGACTT CTTCGCCAAA GGCGGCAAGA TCCGGATCGA CGGCCGCATG GTGCACGACA TGTATCTGGC GGAAGTGAAG AAGCCTTCGG AGTCGAAGGG CCCGTGGGAT TTCTACAACA TCCTCGCGAC GATCCCGGGC GATCAGGCAT TCCGGCCGCT GTCGGAGAGC GCCTGCCCGC TGGTCAAGAA GTAA
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Protein sequence | MMGTYRMAVI GRLTTVALWA GLGVASLGVT SLGVAGLGIG GAAAQQSADT SPVRIGVLTD MSGLFADISG HGAVIAVKMA VDDFGGKVLG RPIEVLSADH QNKADVGLSL ARAWIDEKNV VMLADLMNSS VALGVMELTR NKDRIAIVNG ASTSVITNEK CTPNSIHYTW DTYALARGTA NAVVNRGKKK WALLEADFAY GHQLANDSRR FVEAAGGAVV SEIKHPINTS DFSSFLLQAQ SSGADVIALA NGGADTINSI KSAAEFGIGR GGKQQVVGLA INLNDTKALG LDAAQGLLLT EAFYWDRNDE TRAWSKRFLE KFGKMPTSTQ AGDYSSTMHY LKAVAAAGTL DAQTVMAKMR DTPVDDFFAK GGKIRIDGRM VHDMYLAEVK KPSESKGPWD FYNILATIPG DQAFRPLSES ACPLVKK
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