| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1253 |
|---|
| Symbol | |
|---|
| ID | 4021730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1415713 |
|---|
| End bp | 1416177 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637961446 |
|---|
| Product | regulatory proteins, AsnC/Lrp |
|---|
| Protein accession | YP_568392 |
|---|
| Protein GI | 91975733 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA TCGATCTCAA GATTCTCGGT TGCTTGCAGG AAGACGCCAT GATGCCGGTC
GCGGCCGTGG CCGAGAAGGC GGGGTTGTCG ACCTCGCCGT GCTGGCGTCG GATCCAGGCG
CTGATCGAGA AGAAGATCAT TCGGCGCCGG GTCGCGCTGC TCGACGCCAA TTTGGTCAAC
GTGCCGGTGA CGGTGTTCGT GACGCTGAAG ACCAACAAGC ATCACAGCAA ATGGATGACG
TCGTTCGCGC GCGAGATCGC CAAGATCCCC GAGGTCACCG AATTCTATCG CATGAGCGGC
GAAGTCGACT ATCTGCTGCG GATCGTGGTG CCGGACGTCG CCGCCTACGA CAACGTCTAC
AAGCGGTTGA TCAGCGCGGC CGAACTGTTC GATGTCAGCT CCAGTTTCGC GATGGAGACG
ATCAAATATT CGACCGCGCT GCCGCTCAAT TATGCGGACG TCTGA
|
|---|
| Protein sequence | MDRIDLKILG CLQEDAMMPV AAVAEKAGLS TSPCWRRIQA LIEKKIIRRR VALLDANLVN
VPVTVFVTLK TNKHHSKWMT SFAREIAKIP EVTEFYRMSG EVDYLLRIVV PDVAAYDNVY
KRLISAAELF DVSSSFAMET IKYSTALPLN YADV
|
|---|
| |