Gene RPD_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1244 
Symbol 
ID4021720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1406561 
End bp1407070 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID637961436 
Producthypothetical protein 
Protein accessionYP_568383 
Protein GI91975724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCT CGACGCAACC AACCCCCTCA CCGCGCCCCA GCACTCCGGG CGGCGCAGAC 
GCCGTCGCGC GTGCGGCGCA GCTTGCGGCT GCCAACATCA ATCCGAACAC CGGGCTGGCG
ACCGACTATC TGAACCACTT CAACGAAGCC GTCATGTTGC TCGAAATGAT CCCGGACATG
CCGGAGTGTT CGGAGGATTT TCTCGGCTGG CAACCGCTGT CCTATGCCGA GCATTTCAGG
GCATCGAACT TCAAGGGCCG CGACCTCGCC ATCGAGGCCT ATGACAATGC CGATCCCGGC
ATCCGTTCCG ACTTCGACGA CATCGTCAAC ACCATGACCA GCATCCTCAC GGCGGTCGGC
GACGCGATGC GCGGCGCCCA GCAGGACGCC ACCCGCGCCA GGCTCGCCGA AGAAGCGGTC
GGCTGGATCA AGCCGCTGAT CGGCCGCGCC GGCGGGGTCA TCAACGGCCA GGGCAGCGAA
GCCGACGTCG ACTACATCAT GGCGCACTGA
 
Protein sequence
MMASTQPTPS PRPSTPGGAD AVARAAQLAA ANINPNTGLA TDYLNHFNEA VMLLEMIPDM 
PECSEDFLGW QPLSYAEHFR ASNFKGRDLA IEAYDNADPG IRSDFDDIVN TMTSILTAVG
DAMRGAQQDA TRARLAEEAV GWIKPLIGRA GGVINGQGSE ADVDYIMAH