| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1238 |
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| Symbol | |
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| ID | 4021714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1402418 |
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| End bp | 1403299 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961430 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_568377 |
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| Protein GI | 91975718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.582319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG CCTTTCTCCC CGACCGCGGC GTGATCAAGA TCAGCGGCGC CGACGCGCGC
CACCTGCTAA ACGGCCTGGT CACCACCGAT CTGACACTGC TGAAGCCGGG ACTCGGCCGG
TTCGGGGCGT TGCTGACGCC GCAGGGCAAG ATCGTCGCCG ATTTCCTCAT CACCGAAGGC
GCGGCGGCCG ACGACGGCGG TTTCCTGATC GACTGCCCGA AAGCCCTGGC GCAGCCGCTC
GCCGACAAGC TGAAATTCTA CAAGCTGCGT GCCAAGGTGC TGATCGAGAA CCTGTCCGAC
CGGCTCGGCG TGCTCGCGGC GTGGGGCGGC GCGCCGGCCG AGACGCCGGA ACTCGCCTTC
GCCGATCCGC GCCACGACGA TCTCGGCTGG CGCATCATCA CGCCCGAGCT GCTGGCGCAG
AAGACCGCCG CCGCGATCGG CGCGGAACTG GTGGACGTTG CGGCCTATGA GGCGCATCGC
ATCGCCTGCG GCGCGCCGGC GGGCGGCGTC GACTTCGCCT ATGGCGACGC CTTCCCACAC
GAGTCCAATA TGGACCGGCT GCACGGCGTC GACTTCGGCA AGGGCTGCTA CATCGGCCAG
GAGGTGGTGT CGCGAATGCA TCATCGCGGC ACCGCGCGCA CCCGGATCGT GCGCGTGCTG
CTCGACGGCG CGGGGCCGGA AGCAGGCGCC GAAATCATCG CCGGCGAGAA ATCGGTCGGC
ACCATGGGCT CCTCGGTCGA TGGCCACGGA TTAGCTCTGC TGCGGATCGA CCGCGTCGCC
GATGCGCGCG ACGCGTCGCT GCCGATCAGC GCCGGAGGCA TCACGTTGCG CCTCGCCGAT
CCGGACGAGC TGAAGCCGAT CACGCGCAGG ACCGTGGCAT GA
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| Protein sequence | MKAAFLPDRG VIKISGADAR HLLNGLVTTD LTLLKPGLGR FGALLTPQGK IVADFLITEG
AAADDGGFLI DCPKALAQPL ADKLKFYKLR AKVLIENLSD RLGVLAAWGG APAETPELAF
ADPRHDDLGW RIITPELLAQ KTAAAIGAEL VDVAAYEAHR IACGAPAGGV DFAYGDAFPH
ESNMDRLHGV DFGKGCYIGQ EVVSRMHHRG TARTRIVRVL LDGAGPEAGA EIIAGEKSVG
TMGSSVDGHG LALLRIDRVA DARDASLPIS AGGITLRLAD PDELKPITRR TVA
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