| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1226 |
|---|
| Symbol | |
|---|
| ID | 4021702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1389439 |
|---|
| End bp | 1390401 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637961418 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_568365 |
|---|
| Protein GI | 91975706 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG ACAGTTTCAT TGAGGCTTTG CTGCCGGCGG GCTTTGGGCG CAACGAGCGG
CTGGAGCGCA TTTCCGGCCT GATCGATTGG GACCGTCTTG CCGTCCTGAT CCGCAAGGTG
CGGCCGGGCG AGACCGGTCG CCCGCCCTAC GCGCCGCTGG CGATGTTCAA AGCCTTGCTG
CTGCAGCAGT GGTACGGACT GTCCGACCCC GGCCTCGAAG AGGCCCTGCT CGACCGGGTT
TCGTTTCGGC GCTTTTGCGG GTTCGCGCTG GATGCGCAGA CACCCGACGA GACGACGCTT
TGCCGGTTTC GCAATGCCTT GCTGCAGGCC GGCCTGGGAG ACGCCCTGTT TCAGGAGGTC
CTCCGGCAGC TCGAAGCGGC TGGATATGTC TTGAAGACGG GGACCTTGAT CGACGCCACC
CTGGTTCAGA GTTCAGGGCG AACGCCCCCG TCGGGATCGA CACCGCGCGA GGTCGAGAGC
CGTTCGTCAC ACGACCCGCA GGCCGACTGG ACACGGCACG GCGCCGGACG AAGGCTGTTC
TTCGGCTACA AGGCGCACAT CGCGATCGAT CAGGGATCGG GGCTGATCCG GGCCCGCAAA
CTGACCGGGG CGAAGACGTA TGAGAGCGAA GTCGCCGACG ATCTCGTCCT CGGCGACGAG
AAGGCGGTCT ATGCCGACAA GGCCTACGAG AAGCGGGCGC GCCGCCAAGC CCTCAAAGCC
CGCGGCATCA AGGATCGCAT CCAGCATCGT CGCAACAAAC ACCAGAAGGC GCTGCCGCGA
TGGCAGGCGG TGCGCAACAA GCTGATCGGC CGTGTTCGGC AGGCGATCGA ACGCACCTTC
GCCCAACTGA AAGGCCGCTA CGGCTTCACC CGCATGCGCT ACGCAGGCAT CACCGCCAAC
GCATTCCACC TCGATCTGAT CTCGATCGCC TACAACCTGC GAACCGCAGC CGCCATCCGC
TGA
|
|---|
| Protein sequence | MAQDSFIEAL LPAGFGRNER LERISGLIDW DRLAVLIRKV RPGETGRPPY APLAMFKALL
LQQWYGLSDP GLEEALLDRV SFRRFCGFAL DAQTPDETTL CRFRNALLQA GLGDALFQEV
LRQLEAAGYV LKTGTLIDAT LVQSSGRTPP SGSTPREVES RSSHDPQADW TRHGAGRRLF
FGYKAHIAID QGSGLIRARK LTGAKTYESE VADDLVLGDE KAVYADKAYE KRARRQALKA
RGIKDRIQHR RNKHQKALPR WQAVRNKLIG RVRQAIERTF AQLKGRYGFT RMRYAGITAN
AFHLDLISIA YNLRTAAAIR
|
|---|
| |