Gene RPD_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1219 
SymbolglyQ 
ID4021695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1378278 
End bp1379240 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID637961411 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_568358 
Protein GI91975699 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGA CGCCTCCGCA CATGCGCCCG GAACGCTCGT TCCAGGGCCT GATCCTGACG 
CTGCAGCGTT TCTGGGCCGA TTACGGCTGC GTGATCCTGC AGCCCTACGA CATGGAGGTC
GGCGCCGGCA CCTTCCATCC GGCGACCACG CTGCGGGCGC TCGGCCCGAA ACGCTGGAAC
GCCGCCTATG TGCAGCCGTC GCGGCGTCCG AAGGACGGCC GCTATGGCGA GAACCCGAAC
CGGCTGCAGC ATTATTACCA GTTCCAGGTG ATCCTGAAGC CGTCGCCACC GGACCTGCAG
GATCTCTATC TCAAATCGCT GGCCGCGATC GGCGTCGATA CCGCGCTGCA CGACGTTCGC
TTCGTCGAGG ACGATTGGGA GAGCCCGACG CTCGGCGCCT GGGGGCTCGG CTGGGAGTGC
TGGTGCGACG GCATGGAAGT CAGCCAGTTC ACCTATTTCC AGCAGGTCGC GGGCGTCGAA
TGCGCCCCGG TCGCCGGCGA ACTGACTTAC GGCCTCGAGC GGCTGGCGAT GTATGTGCAG
GGCATCGACC GGGTCTACGA CCTCAACTTC AACGGCCGCG ACGGCGCCGA CAAAGTCACC
TATGGCGACG TCTTCCTGCA GGCCGAGAAG GAATATTCGA AGCACAATTT CGAAGTCGCC
GACACCGAGA TGCTGTTCGA ACAGTTCAAG ATGGCCGAAG CCGCCTGCAA GAAATATCTC
GACGCCGGCT GGCAAGACGG CAAACGCGAA GCGCACGCGA TGGCGCTGCC GGCCTACGAC
CAGTGCATCA AGGCCAGCCA CGTCTTCAAC CTGCTCGACG CCCGCGGCGT GATCTCGGTG
ACCGAACGCC AAAGCTACAT CCTGCGCGTC CGCGAACTGG CCAAAGCCTG CGGCGAAGCC
TGGTTGCATA CGGAAGCGGG CGGTTCTTCA CCCTCCCCTG GAGGGGGAGG GTCGCTCGCG
TAG
 
Protein sequence
MDPTPPHMRP ERSFQGLILT LQRFWADYGC VILQPYDMEV GAGTFHPATT LRALGPKRWN 
AAYVQPSRRP KDGRYGENPN RLQHYYQFQV ILKPSPPDLQ DLYLKSLAAI GVDTALHDVR
FVEDDWESPT LGAWGLGWEC WCDGMEVSQF TYFQQVAGVE CAPVAGELTY GLERLAMYVQ
GIDRVYDLNF NGRDGADKVT YGDVFLQAEK EYSKHNFEVA DTEMLFEQFK MAEAACKKYL
DAGWQDGKRE AHAMALPAYD QCIKASHVFN LLDARGVISV TERQSYILRV RELAKACGEA
WLHTEAGGSS PSPGGGGSLA