Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1219 |
Symbol | glyQ |
ID | 4021695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1378278 |
End bp | 1379240 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961411 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_568358 |
Protein GI | 91975699 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCGA CGCCTCCGCA CATGCGCCCG GAACGCTCGT TCCAGGGCCT GATCCTGACG CTGCAGCGTT TCTGGGCCGA TTACGGCTGC GTGATCCTGC AGCCCTACGA CATGGAGGTC GGCGCCGGCA CCTTCCATCC GGCGACCACG CTGCGGGCGC TCGGCCCGAA ACGCTGGAAC GCCGCCTATG TGCAGCCGTC GCGGCGTCCG AAGGACGGCC GCTATGGCGA GAACCCGAAC CGGCTGCAGC ATTATTACCA GTTCCAGGTG ATCCTGAAGC CGTCGCCACC GGACCTGCAG GATCTCTATC TCAAATCGCT GGCCGCGATC GGCGTCGATA CCGCGCTGCA CGACGTTCGC TTCGTCGAGG ACGATTGGGA GAGCCCGACG CTCGGCGCCT GGGGGCTCGG CTGGGAGTGC TGGTGCGACG GCATGGAAGT CAGCCAGTTC ACCTATTTCC AGCAGGTCGC GGGCGTCGAA TGCGCCCCGG TCGCCGGCGA ACTGACTTAC GGCCTCGAGC GGCTGGCGAT GTATGTGCAG GGCATCGACC GGGTCTACGA CCTCAACTTC AACGGCCGCG ACGGCGCCGA CAAAGTCACC TATGGCGACG TCTTCCTGCA GGCCGAGAAG GAATATTCGA AGCACAATTT CGAAGTCGCC GACACCGAGA TGCTGTTCGA ACAGTTCAAG ATGGCCGAAG CCGCCTGCAA GAAATATCTC GACGCCGGCT GGCAAGACGG CAAACGCGAA GCGCACGCGA TGGCGCTGCC GGCCTACGAC CAGTGCATCA AGGCCAGCCA CGTCTTCAAC CTGCTCGACG CCCGCGGCGT GATCTCGGTG ACCGAACGCC AAAGCTACAT CCTGCGCGTC CGCGAACTGG CCAAAGCCTG CGGCGAAGCC TGGTTGCATA CGGAAGCGGG CGGTTCTTCA CCCTCCCCTG GAGGGGGAGG GTCGCTCGCG TAG
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Protein sequence | MDPTPPHMRP ERSFQGLILT LQRFWADYGC VILQPYDMEV GAGTFHPATT LRALGPKRWN AAYVQPSRRP KDGRYGENPN RLQHYYQFQV ILKPSPPDLQ DLYLKSLAAI GVDTALHDVR FVEDDWESPT LGAWGLGWEC WCDGMEVSQF TYFQQVAGVE CAPVAGELTY GLERLAMYVQ GIDRVYDLNF NGRDGADKVT YGDVFLQAEK EYSKHNFEVA DTEMLFEQFK MAEAACKKYL DAGWQDGKRE AHAMALPAYD QCIKASHVFN LLDARGVISV TERQSYILRV RELAKACGEA WLHTEAGGSS PSPGGGGSLA
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