Gene RPD_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1211 
Symbol 
ID4021687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1369187 
End bp1370845 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content64% 
IMG OID637961403 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_568350 
Protein GI91975691 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.870381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AAACGCTGCC GCCCCGCGAA TCGATGGAAT TCGACGTTGT GATCGTGGGG 
GCGGGACCTT CGGGACTGGC TTCCGCAATC CGCCTGAAAC AGCTCAATCC GGAGCTGTCG
GTGGTCGTCG TCGAGAAGGG CTCCGAGGTC GGCGCGCACA TCCTCTCGGG TGCGGTCATC
GACGTGACGC CGCTCGACAA GCTGATGCCG GGCTGGCGCG AGGACGAGGC CTGTCCGCTC
AAGACGCATG TCGAGGACGA TCATTTCTAC GTCATGACAT CGGAGAAGGC CTACAAGGTC
CCGAGCATCA TGGTCCCGCC GATGCTCAAC AACCACCAGA ACTTCATCGG CTCGCTCGGC
GATCTGTGCC GGTGGCTCGG GCCCAAGGCC GAGGAACTCG GCGTCGAGAT CTATCCCGGC
TTCGCCGCGA CCGAAGTGCT GTACGGCGAC AACGGTGAAG TGCGCGGCGT CGCGACCGGC
GACATGGGCA TTGGCCGCGA CGGCCAGCCC AAGGATTCAT TCACGCGCGG CATGGAACTG
CTCGGCAAGT ACACGCTGTT CGCGGAAGGC GCACGCGGCA GCCTGGCGAA GCAGCTGATC
GCGAAATACA AGCTCGACAA GGACAGCGAT CCGCCCAAAT TCGGCATCGG GCTCAAGGAA
GTCTGGGAGA TCGATCCGTC GAAGCACCGC AAGGGCAGGA TCGCGCATTC GTTCGGCTGG
CCGCTCAGCA ACAACATCGG CGGCGGCTCG TTCCTGTATC ACTACGGCGC GAATCTGGTT
GCGGTCGGCT TCGTCGTGCA TCTCAACTAC GACGATCCGT ATCTGTCGCC GTTCGAGCAG
TTCCAGAAGT TCAAGACGCA CCGTTCGGTC GCGCCGATCT TCGAGGGCGG CAAGCGGATT
TCCTACGGCG CCCGCGCCAT CACCGAGGGC GGCTATCAGT CGGTGCCGCG GCTGACCTTC
CCCGGCGGCG CGCTGGTCGG CTGCGCCGCG GGCTTCGTCA ACGTGCCGCG CATCAAGGGC
GTTCACAACG CGCTCGGCTC CGGCATGCTG GCTGCGGAAC ATGTCGCGGC GGCGCTCGCC
GAAGGGCGCA GCAATGACGA GGTGAAGAGT TACGAGGAGT CGTGGCGCGA TTCCGCGATC
GGCCGCGATC TGTTCAGGAT CCGCAACGTC AAGCCGCTGT GGTCGAAATT CGGCACCGCG
GTCGGCGTGG TGCTGGCCGG CTTCGAGATG TGGTGTTCGA CGCTCGGCTT CTCGGTGTTC
GGCACGCTGT CCCACGGCAA GCCCGACCGT TCGACGCTCG ATCCTGCCCA GTCGCACGAG
CCGCATCCGG GACCGAAGCC GGACGGCAAG CTGACCTTCG ATCGGCTGTC CTCGGTGTTC
CTGTCGAACA CCAATCACGA GGAAGATCAG CCGGTGCATC TGAAGGTTGC CGACATGGCC
CTGCAGAAGA AGTCGGAGCA CGACGTCTTC GCCGGACCGT CCGGGCGCTA TTGCCCGGCG
GCGGTGTATG AATGGGTCGA GGACCCGTCG GGGCCGCGCT TCGTGATCAA TGCGCAGAAC
TGCGTCCACT GCAAAACCTG CGACATCAAG GATCCGAACG GCAACATCAC CTGGGTGCCG
CCGGAAGGTG GCGGCGGGCC GAATTATCAG GGCATGTGA
 
Protein sequence
MSDETLPPRE SMEFDVVIVG AGPSGLASAI RLKQLNPELS VVVVEKGSEV GAHILSGAVI 
DVTPLDKLMP GWREDEACPL KTHVEDDHFY VMTSEKAYKV PSIMVPPMLN NHQNFIGSLG
DLCRWLGPKA EELGVEIYPG FAATEVLYGD NGEVRGVATG DMGIGRDGQP KDSFTRGMEL
LGKYTLFAEG ARGSLAKQLI AKYKLDKDSD PPKFGIGLKE VWEIDPSKHR KGRIAHSFGW
PLSNNIGGGS FLYHYGANLV AVGFVVHLNY DDPYLSPFEQ FQKFKTHRSV APIFEGGKRI
SYGARAITEG GYQSVPRLTF PGGALVGCAA GFVNVPRIKG VHNALGSGML AAEHVAAALA
EGRSNDEVKS YEESWRDSAI GRDLFRIRNV KPLWSKFGTA VGVVLAGFEM WCSTLGFSVF
GTLSHGKPDR STLDPAQSHE PHPGPKPDGK LTFDRLSSVF LSNTNHEEDQ PVHLKVADMA
LQKKSEHDVF AGPSGRYCPA AVYEWVEDPS GPRFVINAQN CVHCKTCDIK DPNGNITWVP
PEGGGGPNYQ GM