| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1196 |
|---|
| Symbol | |
|---|
| ID | 4021672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1355424 |
|---|
| End bp | 1355792 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637961388 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_568335 |
|---|
| Protein GI | 91975676 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAA AGACTGAACC TGACATGTCC CCGATCGCCG TGAGCTACGC CGCGCTCGGT
TGCGCCATCG TGCTGGAGAC GATCGGCACG GCGCTGCTGG CGCAGTCGCA GCAATTCACC
AAGCCATGGC CGAGCGTCGG CACCGCCGTC TGCTACGTCC TGTCGTTTTA TTTACTGTCA
CATGCGCTGA AGACGATGCC GGTCGGGATC GCCTACGCGA TCTGGAGCGG GCTCGGCATC
GTGCTGATTT CGGCAGTCGG CTATATCGCA TTCCGGCAGA CGCTCGATCT CGCCGCGATC
ATCGGCATCG GCTTCATCCT GACCGGCGTC GTGATCGTCA ACGCGTTCTC GACCAGCACC
ACGCATTGA
|
|---|
| Protein sequence | MPSKTEPDMS PIAVSYAALG CAIVLETIGT ALLAQSQQFT KPWPSVGTAV CYVLSFYLLS
HALKTMPVGI AYAIWSGLGI VLISAVGYIA FRQTLDLAAI IGIGFILTGV VIVNAFSTST
TH
|
|---|
| |