| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1191 |
|---|
| Symbol | |
|---|
| ID | 4021667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1348545 |
|---|
| End bp | 1349180 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961383 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_568330 |
|---|
| Protein GI | 91975671 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGGCAC CCGTGCTGGC AGCAGGCGGT ATCGTTTTGC GACGCGGCGG CGATCCTTTG
TTCGCCGTCG TCCGTATGCG CAAGCGCAAC GACTGGGTGC TGCCGAAGGG CAAGCTCGAC
GACGGCGAGA CGCCGCGCGA CGCCGCCGAG CGCGAGGTGC TCGAAGAAAC CGGGCATCTG
GTCGAGGTCC ACGAATTCAT CGGCACGCTC GCCTATGACT CCGGCGGCCG TTCCAAGGTC
GTGCACTTCT GGCGGATGGA GGCCGCGCCG GAGCAGACTC ATCCGTTGAT GAAAGACATC
CGCGCGGTCG ACTGGCTGCC GCTGGATCAG GCGATCGAGC GGCTGACGCG CGCCAATGAG
CGGGCCTTTC TCGCCAATGT CGGCCCGCTG GTGCTCGAAG CCGCGGCCGG CATGGCGCAG
ACGCTTTCAC CGCGACCGAA CGAGGCGCCG CCGCCGGTCA TCGTCCCGTC GCCGCCGGCG
GCGCGCCGAA CGGCGCCGAT CGACGATGGT CCGATCGCCG AACTCGCCGA CGCGCCGTCG
CTGGCGTTGG AGCAGCCCGG TGAGCTCGAG CCCGACGCGC AGCTCACGAT GTTGCAGCGC
ATCCGGAAGT GGTGGCGCGG CGGCTCGCGC GCCTGA
|
|---|
| Protein sequence | MRAPVLAAGG IVLRRGGDPL FAVVRMRKRN DWVLPKGKLD DGETPRDAAE REVLEETGHL
VEVHEFIGTL AYDSGGRSKV VHFWRMEAAP EQTHPLMKDI RAVDWLPLDQ AIERLTRANE
RAFLANVGPL VLEAAAGMAQ TLSPRPNEAP PPVIVPSPPA ARRTAPIDDG PIAELADAPS
LALEQPGELE PDAQLTMLQR IRKWWRGGSR A
|
|---|
| |