Gene RPD_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1182 
Symbol 
ID4021658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1341241 
End bp1341663 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID637961374 
Productregulatory protein, ArsR 
Protein accessionYP_568321 
Protein GI91975662 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC CCAAGCGAGC CCGGAAACCA TCGACTGATG GGCTGGCGCG CGTCGATACC 
AGCGACTTGC GCAAGCACGC GCTGGTCGCC AGCGAATTTC TCAAGACGCT GTCGAACGTG
TCGCGGCTGG TGATGTTGTG TCAGCTCGCC GAGGGCGAGA AGTCGGTCTC CGAACTGGCG
GTGCTGCTCG ACGAACGGCA GCCGACGGTG TCGCAGCAAC TCGCGCGGCT GCGCAGCGAA
CGGCTGGTGC AGCCTCGCCG CGACGGCCAG CAGGTATTCT ATTCGCTCGC CAGCGAGGAA
GTCCGCAGTA TCATTCTCGC ACTGCACGCG ATCTTCTGCG CCAAGCCGCG CGGAAAAGCC
AAGGTGACGG CGCTGCGGCC TGCGACATCG AGGGTGGCAA AGAAGACGGC GGCGCGGCGG
TAG
 
Protein sequence
MSVPKRARKP STDGLARVDT SDLRKHALVA SEFLKTLSNV SRLVMLCQLA EGEKSVSELA 
VLLDERQPTV SQQLARLRSE RLVQPRRDGQ QVFYSLASEE VRSIILALHA IFCAKPRGKA
KVTALRPATS RVAKKTAARR