| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1175 |
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| Symbol | |
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| ID | 4021651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1332500 |
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| End bp | 1334791 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637961367 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_568314 |
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| Protein GI | 91975655 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTG CTCGCGCCAG CGCCGCAGAC CAAGTCGGTC GCGCCCGGGT GCGGGTGCGC
GGCGCGGTCC AGGGCGTGGG CTTCCGGCCG TTCGTCTACG GGCTGGCGCA GCGCTATGCG
CTCGGCGGCT TCGTCGCCAA CGATGCCGAG GGCGTGCTGA TCGAGGTCGA GGGCGGCTCG
ATTGCGGAAT TCCTCGCCGC GCTGCGCTGC GAGGCGCCGC CGCTGGCGCG GGTCGATTCG
ATCGAGACCG AACAACTGCG CGCGCGCGGC GAGCGCGGCT TCGACATCGC CGAGAGCCGC
GCCGGCCGCG TCACGACGCG GATCGGCGCC GATGCCGCGA CCTGCGAGGC GTGCCTCGAC
GATCTGTTCG ATCCGGCGAG CCGCTTCCAT CTCTACCCGT TCGTCAACTG CACCCATTGC
GGCCCGCGCT ACACGCTGAC GCATCGCCTG CCATATGACC GCGCCAACAC AGCGATGGCC
GGCTTTGCGC TGTGCGCGGA TTGCCGCCGC GACTATCAAG ACCCGCGTGA TCGCCGCTTC
CACGCCGAGC CGATCGCCTG CCCGGCCTGC GGGCCGCGGC TCAGCCATCC GATCGACGAG
ATCGTCGAGC GATTGCGCGC CGGCGGCATC GTCGCGCTGA AGAGCCTCGG CGGTTATCAT
CTGCTGTGCG ATGCGACCAA CGAGGCATCG GTCGCCGAGC TGCGCCGGCG CAAGCGCCGC
GACGCCAAGC CGTTCGCGGT GATGGTCGCG TCCGAGGCTT CGCTCGATCG CGTCGTCGCC
GCCGACGCGG CCGAGCGGGC GCTGCTGCGT TCGGTCGAGC GGCCGATCGT GCTGATGCAA
GATCGCGGCG CGCTGGCGCC GTCGGTGGCG CCGGGCCTGC GCCATGTCGG CGTGATGCTG
CCCTACACGC CGTTGCATCA TCTGCTGTTC CACGCCGCGG CCGGATCGCC GCAGGGCCGT
GGCTGGCAGC GCGCGCCGCT GGACCTCGTG CTGGTCGCGA CCAGCGCGAA TTGCGGCGGC
GATCCGATCG TGATCGACGA TGCGGAACGC AAGCTCGGCG GCATCGCCGA CCTGATCGTC
AGCCACGATC GGGACATCGT GGTGCGCGCC GACGACAGCG TGATGGCGAT CAGCGACGGC
GGGCCGGCGT TCATCCGCCG CGCCCGTGGC TTCACGCCGC GGCCGGTCCG GCTGCCGCGC
GAAATCCCGC CGGTGCTGGC CGTCGGCGGT TACTTGAAAA ATACGATCAC GCTGACGCGC
GGCCGCGAGG CGTTCGTGTC GCAGCATGTC GGCGATCTCG CCACCGCCGA CACCGTCCGC
TTCTTCGAAC AGACGATCGC GCATCTGACC CGGCTGGTCG GCGTCGCGCC GGTCGCGGTG
GCGCATGATC TGCACGCCGA CTTCGCCTCG ACCCGCTTGG CCGAAAGCCT CGGGTTGCGG
CTGATCGCCG TGCAGCATCA TCACGCCCAT GTCGCATCGA TAGCCGCCGA ACACGGCATC
GACGCGCCGC TGCTCGGCCT CGTGCTCGAC GGCCATGGCC AGGGCAGCGA CGGCGGCAAT
TGGGGCGGCG AATTGCTGCG CGTCGACGGC GCACACGTCA CCCGGCTCGG CCATCTCGCG
GCGCTGGCGC TGCCGGGCGG CGACGCCGCC GCGCGCGAGC CGTGGCGGAT GGCGGCGGCG
GCGCTGGCCG CGATCGGACA AAGCGAGGCG ATCACCGCGC GGTTTGCCGA TCAGCCGCGC
GCGCCGGCGC TGGCCGCGAT GCTGGCCAAT CATGGCTGCG CCACCACGAC CAGCGCCGGG
CGGCTGTTCG ACGCCGCCGC CGGGTTGCTC GGCGTTTGTT CGGTTCAGGC CTACGAAGGC
CAAGCCGCGA TGCAGCTCGA GGCGCTGGTG CAAACGCCGC GCGTGCTGAT CGATGGCTGG
CGCATCGAAC GCGATGCGCT CGATCTATCG CCGCTGTTGC GCCATCTCGC GACGCCCGGC
CTCGCTCCTG TCGCCGGCGC CGAACTGTTC CACGGTACGC TGGCGGCGGC GCTGGCGAAT
TGGATCGCAC AAGCGTCGGC GCGAACCGGC CTCACCACGA TCGCGCTCGG CGGTGGTTGC
TTCCTCAACC GCGTTCTCAG CGCCGATCTC GCAGCGCGGT TGCGCGCGTG CGGTCTGACG
CCGCTGCCGG CGCGGCAATT GCCGCCGAAT GACGGCGGCC TCAGCCTCGG TCAGGCCTGG
ATCGCCGGAC AGGCGATCGT GAACGACACA GAGGAGGAGC GCCCATGTGC CTCGCCATTC
CCGCCGAAGT GA
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| Protein sequence | MELARASAAD QVGRARVRVR GAVQGVGFRP FVYGLAQRYA LGGFVANDAE GVLIEVEGGS
IAEFLAALRC EAPPLARVDS IETEQLRARG ERGFDIAESR AGRVTTRIGA DAATCEACLD
DLFDPASRFH LYPFVNCTHC GPRYTLTHRL PYDRANTAMA GFALCADCRR DYQDPRDRRF
HAEPIACPAC GPRLSHPIDE IVERLRAGGI VALKSLGGYH LLCDATNEAS VAELRRRKRR
DAKPFAVMVA SEASLDRVVA ADAAERALLR SVERPIVLMQ DRGALAPSVA PGLRHVGVML
PYTPLHHLLF HAAAGSPQGR GWQRAPLDLV LVATSANCGG DPIVIDDAER KLGGIADLIV
SHDRDIVVRA DDSVMAISDG GPAFIRRARG FTPRPVRLPR EIPPVLAVGG YLKNTITLTR
GREAFVSQHV GDLATADTVR FFEQTIAHLT RLVGVAPVAV AHDLHADFAS TRLAESLGLR
LIAVQHHHAH VASIAAEHGI DAPLLGLVLD GHGQGSDGGN WGGELLRVDG AHVTRLGHLA
ALALPGGDAA AREPWRMAAA ALAAIGQSEA ITARFADQPR APALAAMLAN HGCATTTSAG
RLFDAAAGLL GVCSVQAYEG QAAMQLEALV QTPRVLIDGW RIERDALDLS PLLRHLATPG
LAPVAGAELF HGTLAAALAN WIAQASARTG LTTIALGGGC FLNRVLSADL AARLRACGLT
PLPARQLPPN DGGLSLGQAW IAGQAIVNDT EEERPCASPF PPK
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