Gene RPD_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1153 
Symbol 
ID4021629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1311739 
End bp1313667 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content69% 
IMG OID637961345 
ProductSulfate adenylyltransferase, large subunit 
Protein accessionYP_568292 
Protein GI91975633 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0529] Adenylylsulfate kinase and related kinases
[COG2895] GTPases - Sulfate adenylate transferase subunit 1 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00455] adenylylsulfate kinase (apsK)
[TIGR00485] translation elongation factor TU
[TIGR02034] sulfate adenylyltransferase, large subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.340753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG CCATGACCAT CGCCGTCCCG CCTTCCACGC TCGCCACGCC GAACGGTACC 
ACACGTCCGC AGGTCCGCAT CGTCATCGTC GGCCATGTCG ACCATGGCAA ATCGACGCTG
GTCGGCCGCT TGCTGCACGA GACCGGCTCG CTGCCCGAGG GCAAGCTCGA CATGCTGAAG
GCGGTCAGCG CCCGGCGCGG AATGCCGTTC GAGTGGTCGT TTTTGCTCGA CGCGCTGCAG
ACCGAACGCG ATCAGGGCAT CACCATCGAC ACCACCCAGA TCAGCTTCCG TACCCGCTCG
CGCGACGTGG TGCTGATCGA CGCGCCCGGC CACGCGGAAT TTTTGCGCAA CATGATCACC
GGCGCCTCAC AGGCCGACGG CGCGGTGCTG ATCATCGACG CGCTGGAAGG TGTCCGCGAC
CAGACAAGGC GGCACGGCTA TTTGCTGCAG CTGCTCGGCA TCAAGCAGGT CGCCGTGGTG
GTCAACAAGA TGGACCGCGT CGATTTTTCG GCGGCGCGCT TCACTGATAT CAGCGACGAG
ATCACCGCCC ATCTCACCTC GCTCGGCGTC ACGCCGACCG CGGTGATTCC GATTTCGGCG
CGCGACGGCG ACGGCGTCGC CGAGCGGACG ACGAACATCG CCTGGTACGA CGGCCCGACC
GTGGTGGAGG CGCTCGATAC GCTGACGCCA TCGCAGCCGC TCGATCAGCT CGCCCTGCGG
CTGCCGGTGC AGGCAATCTA CAAATTCGAC GATCGCCGGA TCGTCGCCGG CCGCATCGAG
TCCGGCCGGC TGCAAGCCGG CGACGACATC GTCATCATGC CGGCCGGCAA GATCGCCAGG
ATCAAGACGG TCGAGAGCTG GCCGGTGACG CCGGTGTCGG GGCCGCAGGG CGCCGGCCGC
TCGGTCGGCA TCACGCTCGA CCGCGAATTG TTCATCGAGC GCGGCGACGT GATCGGCCAT
GTCGGCGCGG CGCCGCGCGA CACGCGGCGG CTGCGCGCGC GGATCTTCTG GCTGCACGAT
CAGCCGCTGA CCGCAGGCGC CACGCTGCTG GTGCGGCTCG GCGCCCGCGA GACCCGCGCC
ACCGTGGTGG CGATCGAGAA GGCGGTCGAT CCTGGCGATC TCGAAAGCGT CGAGGCCAAG
GCGATCGCGC GCAATCATGT CGGCGAGATT GATCTGTCGC TGGCGCAGCC GGTGGCCGCC
GATCACGCGG ACGAATTCCC GCGCACCGGG CGGCTGGTGG TCGAAGTCGG CGGCCGGATC
GCCGGCGGCG GACTGGTGCT CAGCGTCGAC TCCGGCCAGC GCGCCGCCAC GGCCGACATC
GTGCCGGTGG AATCGGCGCT GCGGCCGGAC GAGCGCGCCG CGCGCTTTCG CCATGGCGGC
GCGGTGCTGT GGTTCACCGG CCTGCCCGGC TCCGGCAAAT CGACGCTCGC CAAGGCGCTG
GAGCGCCGGC TGTTCGACCG CGGCGGCTCG CCGATCCTGC TCGACGGCGA TACGCTGCGC
GCCGGGCTCA ACAGCGATCT CGGCTTTTCG CCGCAGGATC GCAGCGAGAA CATCCGCCGC
CTCGCAGAAA TCGCCGCGCA TCTCGCCGCC AACGGCCACA TCGCGATCGT CGCCGCGGTG
TCACCCGCGC TCGACGACCG CGCCGCCGCT CGCCGCATTG CCGGCGACCG CTTCCGCGAG
ATCCACGTCG CGACGCCGGC CGAAGTGTGC GAGCGCCGCG ATCCGAAGGG ACACTACGCG
AAGGCGCGCG CGGGCGGGTT GCAGAATTTC ACCGGAATCG GCAACGACTA TCAACCACCC
ACCGCGAGCG AACTCGTGAT CGACACCTCG GCGCAAACGG TGGCGGAAGC GGCCGACAAG
GTCGAGGCGA TGCTGGCGGC CAGCGGCGTG CTGTTCGACG AACTGGTCGA TCTTGCCGCA
AATATCTGA
 
Protein sequence
MSDAMTIAVP PSTLATPNGT TRPQVRIVIV GHVDHGKSTL VGRLLHETGS LPEGKLDMLK 
AVSARRGMPF EWSFLLDALQ TERDQGITID TTQISFRTRS RDVVLIDAPG HAEFLRNMIT
GASQADGAVL IIDALEGVRD QTRRHGYLLQ LLGIKQVAVV VNKMDRVDFS AARFTDISDE
ITAHLTSLGV TPTAVIPISA RDGDGVAERT TNIAWYDGPT VVEALDTLTP SQPLDQLALR
LPVQAIYKFD DRRIVAGRIE SGRLQAGDDI VIMPAGKIAR IKTVESWPVT PVSGPQGAGR
SVGITLDREL FIERGDVIGH VGAAPRDTRR LRARIFWLHD QPLTAGATLL VRLGARETRA
TVVAIEKAVD PGDLESVEAK AIARNHVGEI DLSLAQPVAA DHADEFPRTG RLVVEVGGRI
AGGGLVLSVD SGQRAATADI VPVESALRPD ERAARFRHGG AVLWFTGLPG SGKSTLAKAL
ERRLFDRGGS PILLDGDTLR AGLNSDLGFS PQDRSENIRR LAEIAAHLAA NGHIAIVAAV
SPALDDRAAA RRIAGDRFRE IHVATPAEVC ERRDPKGHYA KARAGGLQNF TGIGNDYQPP
TASELVIDTS AQTVAEAADK VEAMLAASGV LFDELVDLAA NI