| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1151 |
|---|
| Symbol | |
|---|
| ID | 4021627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1308993 |
|---|
| End bp | 1309970 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961343 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_568290 |
|---|
| Protein GI | 91975631 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.15877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCC TGAGCCTCGC GGGGCGGCGG CTCGCCGCCT CGATCCCGAC CTTGTTTCTG
ATCCTGATCG GCATCTTCGT GCTGCTGCAA TTCGCGCCCG GCGACACCGT GGACGCGATG
ATGGCGCAGA TGGGTGGCGG CGACGCCGCG ACCGCGCGCG AGCTGCGGCA GTTCTACGGG
CTCGACCTGT CGGTCCCGAT GCAGCTCGGC AACTATCTGT GGCGGCTGGT GCGGTTCGAT
CTCGGCTTCT CGTCGATCTA CGGCAAGCCG GTCGCCACCG TGATCCTGGA GCGGCTGCCG
CCGACGCTGT TGCTGATGAC CGCGTCGCTG TCGTTCGCGT TCTTCGCCGG CCTGGTGCTC
GGCGTGATTG CGGCGCGCGG CGTCAACAAA TGGCCCGACA CGCTGATCTC GACGCTCGGC
CTGATTTTCT ACGCGACGCC GTCGTTCTGG TTCGGGCTGA TGGCGATCGT GGTGTTCTCG
GTCTATCTGC AGTGGCTGCC GGCCGGCGGC TTCGAGGATA TCGGCGCCGC CTCGACCGGC
CTCGCGCGGA CGCTCGACAT CGCCAGCCAT CTGGTGCTGC CGACGCTGAC GCTCGGACTG
ATCTTTCTGG CGATCTATCT GCGGATCATG CGGGCGTCGA TGCTGGAGGT GCTCAATCTC
GATTTCGTCC GCACCGCGCG CGCCAAGGGG CTCGACGAGA CCCGCATCGT CGTCCGCCAT
GTGCTGCGCA ACGCGCTGTT GCCGATGGTG ACGCTGATCG GACTGCAGGC CGGCACCATG
CTGGGCGGCT CGGTGGTGGT CGAGAGCGTG TTCTCGCTGC CCGGCCTCGG CCGGCTTGCT
TATGAATCGG TGGTGCAGCG CGACCTCAAC ACTTTGCTCG GCATCGTGTT CGTCTCGGCG
CTGCTGGTGA TCGCCGTCAA TTTTCTGGTC GACCTGCTCT ATGCGCGGCT CGACCCGCGC
ATCTCCGCCG GGGCCTGA
|
|---|
| Protein sequence | MRILSLAGRR LAASIPTLFL ILIGIFVLLQ FAPGDTVDAM MAQMGGGDAA TARELRQFYG
LDLSVPMQLG NYLWRLVRFD LGFSSIYGKP VATVILERLP PTLLLMTASL SFAFFAGLVL
GVIAARGVNK WPDTLISTLG LIFYATPSFW FGLMAIVVFS VYLQWLPAGG FEDIGAASTG
LARTLDIASH LVLPTLTLGL IFLAIYLRIM RASMLEVLNL DFVRTARAKG LDETRIVVRH
VLRNALLPMV TLIGLQAGTM LGGSVVVESV FSLPGLGRLA YESVVQRDLN TLLGIVFVSA
LLVIAVNFLV DLLYARLDPR ISAGA
|
|---|
| |