| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1143 |
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| Symbol | |
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| ID | 4021619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1299680 |
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| End bp | 1301878 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961335 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_568282 |
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| Protein GI | 91975623 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0995661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACTC ATGTAATTTC GCAGCCCGTC GTCGCCGCGG ACGTCGAGCC GACCGCGGAA
TCGCCGTTCT ACATCGCGAT GGTCGGGCAG GCGGCGCGTC CGCGAACCGT GCTGAAGCAC
GACGACACCT TTCTGGTGAT CGATAGTCAC GGGGACCTCG GCACGGCCGT CGGCGCCGAT
GGACTCTTCA ATGCCGATAC GCGCTATCTC GCCAAGCTGC AGTTGCAGAT CGCCGACGTC
CAGCCGCTGC TGCTCGGCTC CAATTTGCGC GACGACAATT CTGCGCTGAC CGTCGATCTG
ACCAATCCGG ACATCTATCG TGAGGGTCGC CTAGTCCTGG CGAAGGACCT GCTGCATATC
GTGCGCACGA TCTTCCTCTG GCGCGGCACG GCGTTTCAGC GGGTCGGCCT GCAGAACCAC
GGCGACGCCG AAGCGAGTTT CGACCTGACG CTCGACTTCG ATAACGATTT CGCCGATCTG
TTCGAGGTTC GCGGCAGCGT GCGCCCACGG CGCGGCGAAT TCGTCAGCCG CAGACTATCG
TCGAGCGAAG TCATCTTCGA GTATCGCGGT CTCGACCACG CAACCCGCAG TACAATCGTC
ACTTTCGATC CGGCGCCGGC GGATTTGAAG GTCAATCGCG CCGTCTATCA GATCACGCTG
GCGCCGCAAC AGACGGTTTC GGTGTTCGTT GCCGTGAGCT GCAACAAGCC GGCGGCGCAG
AAGCTGCTGC CGTTCTTCCG CAGCCTGCTC GCGCACCGTC GCGAGATGCG GCAGACGACC
TCCGGCGGCA CCACCATCGA GACGTCGAAC GATATCTTCA ACGAAGTGCT GTGCCAGGCG
ATGGCCGACC TCAACATTCT GACGACGGAG ACGCCGCAAG GTCGCTACCC GTATGCCGGC
ATTCCCTGGT ACTCGACGAC GTTCGGACGC GACGGACTGA TCACCGCGCT GCAGATGCTG
TGGATCGATC CGCGCGTCGC GCGCGGCGTG CTGCGCCGGC TCGCAGCCCA TCAGGCAACG
GCGGTCGATC CGCTGAACGA TGCCGAACCG GGCAAGATCC TGCACGAGAT GCGCGGCGGC
GAAATGGCGG CGCTGCGCGA GGTGCCGTTT GCGCAGTACT ACGGCAGCGT GGATTCAACG
CCGCTGTTCG TGATGCTCGC GGGACTTTAT GTCGAGCGCA CCGGCGACGA TGCGACGTTG
AAGGAATTGT GGCCGGCGAT CGAGAAGGCG CTCGGCTGGA TCGACGGGCC GGGCGATCCG
GATCGCGACG GCTTCGTCGA GTATCAGCGA GCGACCGAGC AGGGCCTGCA GAATCAGGGC
TGGAAGGATT CGTACGACGC GATCTTCCAC GCCGACGGCA AGCTCGCCGA GGGTTACATC
GCGCTCGCGG AAGTGCAAGG CTATGTGTTC GCCGGCAAGC GGCTTGCAGC GCTCTGCGCG
CGACGGCTGG GGCTGATCGA TCGAGCCGAT CAGCTCGATA ACCAGGCCGA GCGGCTCGCG
GCCCAGTTCG AGCGGGCGTT CTGGTGCGAG GAGCTCGGCA CCTACGCGCT CGCGCTCGAC
GGCGAAAAGC GGCCGTGCAA GGTGCGAAGC TCGAATGCCG GGCAATTGCT GTTCACGGGA
ATCGTCCGGA CCGATCGGGC GCGGCTGGTC GCGACCGATC TGATGCGGCC GCATTTCTTC
TCAGGCTGGG GCATTCGCAC CATCGCCTGC GGTGAGCCGC GCTACAATCC GATGTCGTAT
CACAACGGCT CGATCTGGCC CCACGACAAC GCTCTGATCG CGCTCGGCCT CGCGCGCTAC
GGCTTCAAGG CCGCGGTCGA GAATGTTTTC AAGGGCCTGT TCGACGCCGC GACCTATATG
GAGTTGCGTC GGCTGCCGGA ATTGTTCTGC GGCTTCCAGC GCGAACGCCG CCGCGGCCCG
ACGTTATATC CGGTGGCGTG CGCGCCGCAG GCCTGGGCCA GCGCGACGCC GTTCACATTG
CTCGAAGCCG CGCTCGGCGT GCATTTCAAC GCCGATCACC GTGAGATCCG GCTGGTCAAT
CCGCGGTTGC CGGCGTTCCT CAATATGGTG GTGCTGCGCG ATTTGCGGCT CGGTGATTCC
AGTGTCGATC TGCGCATTCG GCGGCACGGC GAGGGTGTCT CGATGGAGGT GTTGCGCACC
GATGGGCGGA TTCAGGTTTC GATCGTGCTG GCGCGCTGA
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| Protein sequence | MLTHVISQPV VAADVEPTAE SPFYIAMVGQ AARPRTVLKH DDTFLVIDSH GDLGTAVGAD
GLFNADTRYL AKLQLQIADV QPLLLGSNLR DDNSALTVDL TNPDIYREGR LVLAKDLLHI
VRTIFLWRGT AFQRVGLQNH GDAEASFDLT LDFDNDFADL FEVRGSVRPR RGEFVSRRLS
SSEVIFEYRG LDHATRSTIV TFDPAPADLK VNRAVYQITL APQQTVSVFV AVSCNKPAAQ
KLLPFFRSLL AHRREMRQTT SGGTTIETSN DIFNEVLCQA MADLNILTTE TPQGRYPYAG
IPWYSTTFGR DGLITALQML WIDPRVARGV LRRLAAHQAT AVDPLNDAEP GKILHEMRGG
EMAALREVPF AQYYGSVDST PLFVMLAGLY VERTGDDATL KELWPAIEKA LGWIDGPGDP
DRDGFVEYQR ATEQGLQNQG WKDSYDAIFH ADGKLAEGYI ALAEVQGYVF AGKRLAALCA
RRLGLIDRAD QLDNQAERLA AQFERAFWCE ELGTYALALD GEKRPCKVRS SNAGQLLFTG
IVRTDRARLV ATDLMRPHFF SGWGIRTIAC GEPRYNPMSY HNGSIWPHDN ALIALGLARY
GFKAAVENVF KGLFDAATYM ELRRLPELFC GFQRERRRGP TLYPVACAPQ AWASATPFTL
LEAALGVHFN ADHREIRLVN PRLPAFLNMV VLRDLRLGDS SVDLRIRRHG EGVSMEVLRT
DGRIQVSIVL AR
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