| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1134 |
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| Symbol | |
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| ID | 4021610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1289667 |
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| End bp | 1290608 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637961326 |
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| Product | regulatory proteins, IclR |
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| Protein accession | YP_568273 |
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| Protein GI | 91975614 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.458638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCA AGAAACCGAC GCGGCGTTCC GCGACTACGC GTCGGCCGGC GGCCAAGACG
GTCGCCGAGC GGAGCGCCGT GACGCCGGCG AGCGAGGAGC GAGCACAGCG CCGCGCCAAA
CAACAGGCGT TGCAACGCGC CTCGCGGCGA CCGCGCGCCG GCGCGGCGGA CAGCGACGAC
GCCGGCGGCC GGTTGTTCGT GTCGGCGCTG GCGCGCGGGC TCGACGTGCT CGGCGCATTC
CGCGCCGGTG ATCGCGCGCT CGGCAACCGC GAACTCGCCG AGCGCACCGG CCTGCCGAAG
CCGACGATTT CGCGGATGAC GCACACGCTG ATCCAGCTCG GCTACCTGTC CTACGATCCG
CGATCGGCGA CCTATCAGCT CGGTGCGCGC GCGCTGGCGC TGAGCTACGC GGCGCTGGCC
AATCTCGACG TGCGCAAGGC CGCGCTGCCG ATCATGACCG AACTGGCGGA GGCCAGCCAT
TTGCATCTCG GGCTCGGCAC CCGCGAGCGG CTGACGATGC TGAATATCGA GAGCTGCGAG
GGCAATGCGC TGGTCGGGCT GCGGCTGCCG TCGGGCTCGC GCGTGCCGAT GGCGACGACG
GCGCTGGGCA AGGCCTATCT CGCCGCGATC GGCGACGACG AGCGGCGTTT GTTGTTCACG
GAATTGCGCA AGCAGCACGG CGAGGATTGG CCGAAGATGC TGAAATCGAT CGAGCGCTCG
ACGACCGAAA TCGCCAGGCG CGGCTTCTGC CTGTCGACCG GCGAGTGGCG CAAGGACATC
AATGCGGTCG GCGCCGCGAT CGTCCCGCCG GCCGGCGGCG CGGTGTATGC GCTCAGCTTC
GGCGGCCCGG CCTATCTGGT GTCGCCGCAG CAATTGCTCG AACAGCACGG GCCGGCGCTG
GCGAAGGCGG CGAAGAGGAT CAGCGCCGCG CTCGGCGCGT GA
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| Protein sequence | MTAKKPTRRS ATTRRPAAKT VAERSAVTPA SEERAQRRAK QQALQRASRR PRAGAADSDD
AGGRLFVSAL ARGLDVLGAF RAGDRALGNR ELAERTGLPK PTISRMTHTL IQLGYLSYDP
RSATYQLGAR ALALSYAALA NLDVRKAALP IMTELAEASH LHLGLGTRER LTMLNIESCE
GNALVGLRLP SGSRVPMATT ALGKAYLAAI GDDERRLLFT ELRKQHGEDW PKMLKSIERS
TTEIARRGFC LSTGEWRKDI NAVGAAIVPP AGGAVYALSF GGPAYLVSPQ QLLEQHGPAL
AKAAKRISAA LGA
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