Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1129 |
Symbol | |
ID | 4021605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1284874 |
End bp | 1285833 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961321 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_568268 |
Protein GI | 91975609 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.705789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.314496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGGA TCGCTTGCTA CAAGATGGGC ATCATGCCCG ACACCTCCAG CGAACCGCGT GCGATCTCCT TCGATGAGAA GGCCCGGATG CTCCAGCTCC GCCGCTCGAT CCACGGCGCC ATCATCGGCC TCAAGCTCGA CCGGTTCGCG CCGGCGCAGG CCTGGAGCAG CCTGCCCTAT CATCCGGTGT TCGTCGGCGA CACCCGCACC GGCGTCATTC ACGGCGGCGT CGTCACCGCG ATGCTCGACG AGAGCTGCGG CATGGCGGTG CAACTCGCGC TGCCCGACAC GCCGGCGATC GCGACGCTCG ATCTGCGCAT CGACTATCTG CGGCCGGCGA CGCCCGGACA GGCGATCCGC GCGCACGCGC ATTGCTATCA CCTCACCCGG TCGATCGCCT TCGTCCGCGC CACCGCCTAT CAGGACTCCG AGGCCGATCC GATCGCCAGC GCCACCGCGA TGTTCATGAT CGGCGCCAAC CACACCGATA TGCTGCGGCA AACGCCGAAG GTGCATTTCG ACACCCCGCC GCCGCTGGTG GCCCCGGAGG ACCCCGACGG GCCGCTCGGG ATCAGTCCCT ATCCGCGCTT TCTCGGCATC CGGGTCAACG CCGACGCGCA GCCGGTGATG CCTTACGATC CGAAGCTGGT CGGCAATCCG ATCCTGCCGG CGCTGCATGG CGGGGTGATC GGCGCGTTTC TGGAAACTGC GGCGATCGTC AGCGTTCATC GCGAGATCGG CCTCGCCACC GCGCCGAAGC CGATCGGCCT GACCGTGAAC TATCTGCGCT CCGGCCGGCC GCTCGACACC TACGCCAAAG TCTCGATCGT CAAGCAGGGC CGCCGCGTCG TCGCGTTCGA GGCGCAGGCC TATCAGGCCG ATCCCGCCAA GCCGATCGCG TCCTGCTACG GCCATTTCAA GCTGCGCGCG GCACCCTCGC GCGACGGCAC CAGAGCATGA
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Protein sequence | MAGIACYKMG IMPDTSSEPR AISFDEKARM LQLRRSIHGA IIGLKLDRFA PAQAWSSLPY HPVFVGDTRT GVIHGGVVTA MLDESCGMAV QLALPDTPAI ATLDLRIDYL RPATPGQAIR AHAHCYHLTR SIAFVRATAY QDSEADPIAS ATAMFMIGAN HTDMLRQTPK VHFDTPPPLV APEDPDGPLG ISPYPRFLGI RVNADAQPVM PYDPKLVGNP ILPALHGGVI GAFLETAAIV SVHREIGLAT APKPIGLTVN YLRSGRPLDT YAKVSIVKQG RRVVAFEAQA YQADPAKPIA SCYGHFKLRA APSRDGTRA
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