Gene RPD_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1126 
Symbol 
ID4021602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1281378 
End bp1282154 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID637961318 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_568265 
Protein GI91975606 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.708426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.315774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC ATGGTAAGAC GCTGCACGGT AAAAAGGGAC TGGTGGTCGG GATCGCCAAC 
GCGGACAGCA TCGCTTTCGG CTGCGCCCGT GCGTTCCGCG ACGCCGGCGC CGAACTCGCC
GTTACCTATC TCAACGACAA GGCGAAGCCG TATGTCGGGC CGCTGGCGGA GCAGCTGCAG
AGCCCGATCG TCGTCCCCTG CGACGTGCGC GAGCCGGGGC AGCTCGAGGC GGTGTTCGCG
CAGATCGGCG AGCGATGGGG CCGGCTCGAC TTTCTGCTGC ATTCGATCGC CTTCGCGCCG
AAGGATGACC TGCAAGGCCG GGTGGTCGAT TGCTCGCAGG CCGGCTTCGC GATGGCGATG
GATGTGTCCT GCCATTCCTT CATCCGGATG GCGCGGCTGG CCGAGCCGCT GATGCCAGAT
GGCGGCTGCC TGTTGACGGT ATCTTTTTAC GGCTCCGATA AGGTGGTCGA AGACTACAAT
CTGATGGGGC CGGTGAAGGC CGCGCTGGAA AGCTCGGTGC GCTATATGGC GGCGGAGCTG
GCGCCGAAGC GCATCCGCGT CCATGCCCTG TCGCCCGGGC CGCTGAAGAC CCGCGCCGCC
TCCGGCATCG CGCGTTTCGA CGAACTGCTG GAGCGGACCC GCGCCCGCGC TCCCGCGCAC
AATCTCGTCA GCATCGAAGA CGTCGGCAAC GTCGCGACCT TCCTGGTCGG CGACGGCGCC
AGCGCGCTGA CCGGCAATAT CGAATACATC GACGCGGGCT ATCACGTCGT CGGCTGA
 
Protein sequence
MTLHGKTLHG KKGLVVGIAN ADSIAFGCAR AFRDAGAELA VTYLNDKAKP YVGPLAEQLQ 
SPIVVPCDVR EPGQLEAVFA QIGERWGRLD FLLHSIAFAP KDDLQGRVVD CSQAGFAMAM
DVSCHSFIRM ARLAEPLMPD GGCLLTVSFY GSDKVVEDYN LMGPVKAALE SSVRYMAAEL
APKRIRVHAL SPGPLKTRAA SGIARFDELL ERTRARAPAH NLVSIEDVGN VATFLVGDGA
SALTGNIEYI DAGYHVVG