Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1121 |
Symbol | |
ID | 4021597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1275681 |
End bp | 1277300 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961313 |
Product | ABC transporter related |
Protein accession | YP_568260 |
Protein GI | 91975601 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0474016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAGAGC GTAGCGCCCA ATTGAATTAC ACGTCTTCGT CTCAAGATCG CCCATCCGAC GCCTCTGCGG CAGCGCCGCC GGAGCGTCCG CCGCTGTTTC AGGGCCTCGG CCTGACCAAG CGCTATGGCG ATTTCACCGC CAATTCGGCG ATCGATATCG CGATCGCGCC GGGCCAGATC CATGCGCTGC TCGGCGAGAA CGGCGCCGGC AAGTCGACGC TGGTCAAGAC CATCTGCGGG CTGATCCAGC CGGACGACGG CGCGATGCGC TGGCGCGGCG CGCCATTCGC GCCCGCCGGC CCGGCCGATG CGCAAGCCTG TGGCATCGGC CTCGTCTCGC AGCATTTCGC GCTGTTCGAC AATCTCACCG TCGCCGAGAA CGTCGCGCTC GGACAGCGCG GCGGTGAATC ACTCGACATC CTATCGAGAC GGCTGGCGCA GATCGCCGAA CGCTACGGGC TGCCGCTCGA TCCGAAGCGC GAGGTGTGGC GGCTGTCGGT CGGCGAGCGG CAGCGGATCG AGATCGTCCG CGCGCTGATG CAGGATCCGC AATTCCTGAT CCTCGACGAG CCGACCGCGG TGCTGACGCC GGCCGAAGCC GACCGGCTGT TCGATGTACT GGAGCAATTG CGAGCCGATG GCCGCGCGCT GCTCTACATC TCCCACAAGC TCGAAGAGGT GAAGCGGCTG TGCGACACCG CCACGATCCT GCGCGCCGGT CGCGTCGTCG CCGCCTGCAA CCCGCGCGCC GAGACCGCGG CGTCGCTGGC GCGGATGATG GTCGGCGTCG ACGTGATCCC GCCCAAGCCG CAGCCCGGCC ACAGCATCGG CGCGCCGCGC CTCGTCGTGA ACGGGCTCAG CCTTGCGCCC GACGATCCGC ACGGCGTGAC GCTGAAGCAG ATCGATCTGC AGCTGCGCGG CGGTGAGATC GTCGGCATCG CGGGCGTCGC CGGCAACGGC CAGGACGAAT TGTTCGCGGC CCTGTCCGGC GAAGCGCCAC TCGACGAGGC GCGAACGATC CTGATCGACG GACAGGCGGC CGGCGATCTG TCGATCACGG CGCGACGCCG GTTCGGCGCC GCTTTCATCC CGGAGCAACG GCTCGGCCAC GCCACCGTGC CGACGATGCG GCTGTCCGAA AACGCGCTGC TCACGAGCCA CGCCGACCCC GGCGTGGTGC GGCGCGGTTT CGTCGATCGG GCCGCCCTGC TCGGTCTCGT CGATCGGGTC ACCGCGGCGT TCGGGGTGCG CAAGGCTCAG CGCGATCCGG AGGCCGAGCG ATTGTCCGGC GGCAATCTGC AGAAATTCAT CGTCGGCCGC GAAATTCTGC GCCAGCCGAA GCTGCTGGTG GTCAACCAGC CGAGCTGGGG GCTCGACGCC GGCGCGGCCG CGGCGATCCG GCAGGCGCTG ATCGATCTCG CCGCAGGCGG CGCGGCGGTG CTGGTGATCA GCCAGGACCT CGACGAACTG CTCGAAATCG CCGACAGCAT CGCGGTGATG TATCACGGCC GGCTGTCGCC GCCGCTGGCC GCGGCCGAGA CCGGTCGCGA GCAGCTCGGG CTTCTGATGG GCGGCAGCGG CTGGCCGCAA CAGAGTGTGC ACGATGCAAT TCCTGCTTGA
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Protein sequence | MEERSAQLNY TSSSQDRPSD ASAAAPPERP PLFQGLGLTK RYGDFTANSA IDIAIAPGQI HALLGENGAG KSTLVKTICG LIQPDDGAMR WRGAPFAPAG PADAQACGIG LVSQHFALFD NLTVAENVAL GQRGGESLDI LSRRLAQIAE RYGLPLDPKR EVWRLSVGER QRIEIVRALM QDPQFLILDE PTAVLTPAEA DRLFDVLEQL RADGRALLYI SHKLEEVKRL CDTATILRAG RVVAACNPRA ETAASLARMM VGVDVIPPKP QPGHSIGAPR LVVNGLSLAP DDPHGVTLKQ IDLQLRGGEI VGIAGVAGNG QDELFAALSG EAPLDEARTI LIDGQAAGDL SITARRRFGA AFIPEQRLGH ATVPTMRLSE NALLTSHADP GVVRRGFVDR AALLGLVDRV TAAFGVRKAQ RDPEAERLSG GNLQKFIVGR EILRQPKLLV VNQPSWGLDA GAAAAIRQAL IDLAAGGAAV LVISQDLDEL LEIADSIAVM YHGRLSPPLA AAETGREQLG LLMGGSGWPQ QSVHDAIPA
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