| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1118 |
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| Symbol | |
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| ID | 4021594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1272545 |
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| End bp | 1273624 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961310 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_568257 |
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| Protein GI | 91975598 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0536373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.804172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGA CGATTGTAAC GGCTGCGCTG GTGCTGGCGG CGGGCTGCGC CGGACTGTCG
GCGGCCTCCG CGGCGGACAA GCTCAAGATC GGCTTCGTCT ATATCGGCCC GATCGGCGAT
TTCGGCTGGA CCCATCAGCA CGATCTGGCG CGCCAGGCCG TCGTCAAGGA ATTCGGCGAC
AAGATCGAGA CCACCTTCCT CGAAAGCGTC GGCGAAGGCC CCGACGCCGA GCGCTCGATC
GAGCAGCTCG CGCGCGCCGG CAACAAGCTG ATCTTCGCCA CCTCGTTCGG CTACATGGAT
TCGACCATCA AGGTCGCCAA GAAATATCCC GACGTGAGGT TCGAGCACGC CACCGGCTAC
AAGCGCGAGC ACAATGTCGC GACCTATTCG GGCCGGTTCT ACGAGGGCCG CGCGATCCAG
GGCGCGATCG CGGCGAAAAT GTCGAAGAAG GGTGTGATCG GCTATATCGG TTCGTTCCCG
GTGCCGGAAG TGATCTCCGG CATCAACGCC ACGATGCTGG CGGCGCAGAA AATCAATCCG
AACATCAAGG TCAAGATCGT CTGGGTGAAC TCCTGGTTCA ACCCCGGCAA GGAAGCCGAC
GCCGCCAAGG CGCTGCTCGA TCAGGGCGCC GACGTGATCA TGCAGCACAC CGACAGCGCC
GCGCCGATGC AGGTCGCCAA TGAGCGCGGC GCGTTCGCCT TCGCGCAGGC CACCGACATG
ATGAAGTTCG GCGCCAAGGC TCAGCTCACC GGCATCGTCG ATAACTGGAC GCCGTACTAC
ACCTCCCGCA TCAAGGCGGT GCTGGAGAAC AACTGGCAGT CGGGCGACAC CTGGGGCGGC
CTCAAGGACA AGATGATCCT GATGGCGCCC TATACCAACA TGCCGGAGGC CGTGAAGAAG
CTCGCGGTCG AGACCGAGGC CGGCATCGTC GACGGCAGCA TCAAGCCGTT CGCCTGCCCG
ATCCTGGATC AGGACGGCAA GGAGATCGAG TGCAAGGGCG GCGACCGCCT CGACGACAGC
CAGGTGCTCG GCATGAATTT CTACATCAAG GGCATCGACG ACAAGATTCC CGGCAAGTAG
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| Protein sequence | MRKTIVTAAL VLAAGCAGLS AASAADKLKI GFVYIGPIGD FGWTHQHDLA RQAVVKEFGD
KIETTFLESV GEGPDAERSI EQLARAGNKL IFATSFGYMD STIKVAKKYP DVRFEHATGY
KREHNVATYS GRFYEGRAIQ GAIAAKMSKK GVIGYIGSFP VPEVISGINA TMLAAQKINP
NIKVKIVWVN SWFNPGKEAD AAKALLDQGA DVIMQHTDSA APMQVANERG AFAFAQATDM
MKFGAKAQLT GIVDNWTPYY TSRIKAVLEN NWQSGDTWGG LKDKMILMAP YTNMPEAVKK
LAVETEAGIV DGSIKPFACP ILDQDGKEIE CKGGDRLDDS QVLGMNFYIK GIDDKIPGK
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