| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1113 |
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| Symbol | |
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| ID | 4021589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1266403 |
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| End bp | 1267725 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961305 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_568252 |
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| Protein GI | 91975593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAG CCGTGCCGAG CCATGTCGCC GATCCGCCCG CGATCGTCAG GGACGCGGGT
GATTTGCGCC CAGCCGGGCG CGGCGGATAT CTGCTGCCAA ACGGCTATCT CAGCACGTCG
GGCAGTCAGA TCGTCGATGC TTCGGGCCGG CCGGTCCGCA TCGCCTCGAT CGGCTGGAAC
GGCACCGAGG GGCCGCTCGG AGCCGCGCCA TCGGGCATCT GGCGCGTCAG CTACAAGACC
GTCCTCGACT CGATCGTCGC GGCCGGCTTC AACGCGGTGC GAATTCCATG GACCGATATC
GGGCTGAATG CGCCGCTCAA CGGCTACAGC GACCGGCTCG GCTGGATCAA CATCACGCTG
AACCCGGAGC TGCTCGCGAG CTCCACGCCG AATTCGCAGG GTCGCTACCA ATACGTCACC
ACGCTGGTCG CGTTTCAGCG CATCGTCGAC TACGCGCAGG AGATCGGCCT CAAGGTGATC
TTCAATCATC ACACCAATCA GGGCACCGCC GGGCAGCAGC GCAACGGGCT GTGGTTCGAC
CTCGGTCCCG GCACCGACAA CACGGATGGA ATCGTGCCGG GCAGGGTCAC GGCGGAAACC
TTCAAGCAGA ACTGGCTGCT GGTTGCGCGG ACCTTCGCGA ACAATCCGAC CGTGATCGGC
TACGATCTGC ACAACGAACC GAATGGCGAT CGCGGCCACA TCACCTGGGG TGGCGGCGGA
CCGACCGACA TCAAGGCGAT GTGCGAGGAT GTCGGTTCGG CGATCCAGGA CGTCAGCCCC
GGCGTGCTGA TCATCTGTGA AGGGCCGGAA ACCTACAAGC CGCCGCCGGC GTCATCGGGC
ATGGACCCGC GCCACGCGGC GCCGGCGGGA AATCTCACCG CGGCGGGCGC CAACCCCGTG
AAGCTGAAGA TTGCGAACAA GCTGGTGTAT TCGATTCACG AATATCCGGA CGAGATCTCG
GACACCAAAC GCTGGGGGTT GCCGGAGGTT GGCAAGGGCT TCATCGACCG GATGAATTTC
ACCTGGGGCT ATCTGGTCCG CGACAACATC GCACCGGTGT GGATCGGCGA AATGGGCGCG
TCACTGCGAA CGCCCGAAAC GCGCGAATGG GCGCGCAATT TGATCGACTA CATGAACGGA
AAATACGGCC AGGAGGGCGG GCCGACATTC TCGGGCGACC AGCAGCCGGT CAGCGGAAGC
TGGTGGCTGA TCGGGCCGTC GAACGATCCG CCGTTTGGCC TGCAGACCGA ATGGGGCGTC
GGCAACTATC GTCCCGATCA GATCGCGATC ACCGACGAGA TGCTTATGCG TCCGCGCAAC
TAG
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| Protein sequence | MDAAVPSHVA DPPAIVRDAG DLRPAGRGGY LLPNGYLSTS GSQIVDASGR PVRIASIGWN
GTEGPLGAAP SGIWRVSYKT VLDSIVAAGF NAVRIPWTDI GLNAPLNGYS DRLGWINITL
NPELLASSTP NSQGRYQYVT TLVAFQRIVD YAQEIGLKVI FNHHTNQGTA GQQRNGLWFD
LGPGTDNTDG IVPGRVTAET FKQNWLLVAR TFANNPTVIG YDLHNEPNGD RGHITWGGGG
PTDIKAMCED VGSAIQDVSP GVLIICEGPE TYKPPPASSG MDPRHAAPAG NLTAAGANPV
KLKIANKLVY SIHEYPDEIS DTKRWGLPEV GKGFIDRMNF TWGYLVRDNI APVWIGEMGA
SLRTPETREW ARNLIDYMNG KYGQEGGPTF SGDQQPVSGS WWLIGPSNDP PFGLQTEWGV
GNYRPDQIAI TDEMLMRPRN
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