| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1107 |
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| Symbol | |
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| ID | 4021583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1257847 |
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| End bp | 1259199 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961299 |
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| Product | putative membrane protein involved in export of O-antigen |
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| Protein accession | YP_568246 |
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| Protein GI | 91975587 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.361388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCA GCGTCGCGAT CGAGAAAATC ATCGGACTGC GCAACAACTC CACGGTCCGC
GCGATGACCG GAGCGTTGGC GTTGCGGGTC GCCATTACCA TCGTCAATCT CGCGCTGGTG
ACTCTCGCCG CGCGCATGCT GAGCCGCCAC GATTTCGGCA GTTATTCCAT GCTGTTCAGC
GCGGCCAGCC TGCTCAGCGT GATCGCGACG TTCGGACAGC AGATCTTCAT CATGCGTTCA
TGGAGCGAAT TCGGCTCCGC GGGCGATGAG AAAATGCTGA AGGGCGCGAT GACCTTCAGC
GCGCTCGCCT GCGCCGCCGG CGTCACCCTG GTCGGCGTGC CGTTCTACTT CTGGTTCGCG
GCCGAGCACG ACAGCCTTCT CGCGCTATCG GCGACGCTTT ATTTGGTCTG TTTCTCGCTG
GTTCTGACGT CCGGTCATCT GACACGCAGC GCGGTCGGCG TCGGCGTCGG CGACGGGCTG
ACCTATCTGC TGGTGGCGAT CTGCCCGATT CTCTATCTGA CCGGATGCTT CGTCACCGGC
GCGCCGATCC AGATTCACCG GATCTTCCTG GCGATGGCAG CGGCCGCGAG CTTCGCCGTC
CTGGTCCAGA TGGCGCTGCT GAGGCGGCGG GTGCGCGTGC AGTTTCCGAA CCTCCGCCAA
AGCAAATCGA CCTTCGATCT GCGCACCTGG ATCACGCGGT CGAGCAAGCT GTGCGTCTCG
AGCGGGCTCG AAGCCGCCAA TCAATATGCC GACGTGGTGA TCATCGGCTA TCTGACCTCG
CCCTCCGTCG CCGGCGCCTA TTTCGTCACG ACGCGGATCG CCAACGCTTT CGCGATGGTG
ACCGGCGCGG TCTACATCTT CTCCACCCGC CACATTCCGA ACCTGTACTA CAATCAGCAG
CATCGGCAGC TCGACAGCCT GCTGGATTCG GTCGCGCTGG TGACTCTGAC GATCATCGTC
GCCGGCCTGG TGGTGGTGCT CGGCGGCGGG CACTGGATCC TCTACGCTTT CAATCCCGAG
TACGTGTCGT ATTACGGCGC ACTGGCGATG CTGACCGCGG GAACCGCCGC CGTCGCGGCC
TCAGGCCCGT CCGGCTCGAT CCTGATGCTG ACGGGACACG AGGGCCGCTA TCTCGCCATC
ATCGGCGGCA CGGTGCTGAT GCGCGCCGTC GGCTTCTTCC TGCTGATCCC GTGGTTCGGC
ATTCCCGGCG CGGTGGCTGC AACGACGATC TCGTTCATCA CGCTGGCGAT CCTGCTGCGG
AACGCCGCCA AGAGCGCGGC CGGCATCGAC GGCTCGGTGC TGCGGCTGCT GACGCGGCTG
CGGCACGGAC GGATCTCGCT ACGCCCCGAG TGA
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| Protein sequence | MKFSVAIEKI IGLRNNSTVR AMTGALALRV AITIVNLALV TLAARMLSRH DFGSYSMLFS
AASLLSVIAT FGQQIFIMRS WSEFGSAGDE KMLKGAMTFS ALACAAGVTL VGVPFYFWFA
AEHDSLLALS ATLYLVCFSL VLTSGHLTRS AVGVGVGDGL TYLLVAICPI LYLTGCFVTG
APIQIHRIFL AMAAAASFAV LVQMALLRRR VRVQFPNLRQ SKSTFDLRTW ITRSSKLCVS
SGLEAANQYA DVVIIGYLTS PSVAGAYFVT TRIANAFAMV TGAVYIFSTR HIPNLYYNQQ
HRQLDSLLDS VALVTLTIIV AGLVVVLGGG HWILYAFNPE YVSYYGALAM LTAGTAAVAA
SGPSGSILML TGHEGRYLAI IGGTVLMRAV GFFLLIPWFG IPGAVAATTI SFITLAILLR
NAAKSAAGID GSVLRLLTRL RHGRISLRPE
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