Gene RPD_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1093 
Symbol 
ID4021569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1242666 
End bp1243121 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID637961285 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_568232 
Protein GI91975573 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGA ACCTGATCCT CACCTCCAAG ACCGATGTCG AACTGAAGCC GGCGCCGATC 
GAGCCGTCGT GGATCATCGA GGGCACCCCG ACCGCGACCA ACGCGACGCT GTCGCGCAGT
GCCGACGGCA TGGCGTCGAC GATCATCTGG CAGTGCACCG AAGGCAAGTT CAACTGGCAC
TACGACATCG ACGAGACGAT CTGCATCCTC GAAGGCTCGG TGGTGATCGA GAGCGAGGGC
ATGCCGGCGA CCCGCTACGG ACCGGGCGAC GTGATTTTCT TCAAGGATGG CGCCAGCGCG
CGCTGGCATG TCGAGGGTCA CATCCGCAAG ATCGCGTTCT GCCGTCGCAC CCAGCCGAAG
CTGGTCGGGT TGGCGCTGCG GGTGTTCGCC AAATTGCGAT CGTTGCTGAT GCCGTCCCAA
CAGCGCCCGA CGCAATCGCT GCTCGGCGCT AATTGA
 
Protein sequence
MSTNLILTSK TDVELKPAPI EPSWIIEGTP TATNATLSRS ADGMASTIIW QCTEGKFNWH 
YDIDETICIL EGSVVIESEG MPATRYGPGD VIFFKDGASA RWHVEGHIRK IAFCRRTQPK
LVGLALRVFA KLRSLLMPSQ QRPTQSLLGA N