Gene RPD_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1092 
Symbol 
ID4021568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1241852 
End bp1242436 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID637961284 
Producthypothetical protein 
Protein accessionYP_568231 
Protein GI91975572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.257178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCCCA ATTTCGGCAG GTCTGGCAGA CCTTCAATAC TCGGTGTTGT GTATTCGGAT 
GGCGCCGCCG CCTGCCGCAT GATTTCCGAT CTCGGCTATC GATTGCGGGA CGCTGGCGCG
ATGGTCGCGG GAATCGTCCC GTATCACGCG ACGCGTGACG GCACCCCGCG TTGCGACATG
GAAGTCGAGG AACTGTCCTC GCGGATCATC CTGCAGCTTG CCGAGGACCA GACTCCGCAA
GCTTCCGGCT GCCGGGTCGA TCCCACAGCG ATGCAGGACG CCGCCGCACT CATCTCGGCC
GCGTTTCAGA AATGCCCCGA GCTGCTGATC ATCAACAAAT TCGGTCGACT CGAGGCCGAA
GGTTACGGCC TCGGCGACGT GATCACCGAG GCGGTCGACC TGGGCATTCC GGTGCTGATC
GGCGTTCCGG AGCGCCACAT CAAGCAATGG CGCGAATTCA GCAATGGCCT CGCCGAGGAA
GCGATGATCG ATTCGCCGCG CGTGCAGCAA TGGCTGGCGC GGCGCGGGTT CGTGTCTCAG
CGGAACCGAG TCGGACTGGA GCGTGCGCTC AACACGGCGG CCTGA
 
Protein sequence
MGPNFGRSGR PSILGVVYSD GAAACRMISD LGYRLRDAGA MVAGIVPYHA TRDGTPRCDM 
EVEELSSRII LQLAEDQTPQ ASGCRVDPTA MQDAAALISA AFQKCPELLI INKFGRLEAE
GYGLGDVITE AVDLGIPVLI GVPERHIKQW REFSNGLAEE AMIDSPRVQQ WLARRGFVSQ
RNRVGLERAL NTAA