Gene RPD_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1090 
Symbol 
ID4021566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1240127 
End bp1241434 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content61% 
IMG OID637961282 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_568229 
Protein GI91975570 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG AACGTTTCGA TGCGATCGTG GTCGGCGCCG GCATGGCCGG AAACGCCGCC 
GCGCTGACAA TGGCCAACCG CGGCATGAAG GTGCTGCAGA TCGAGCGCGG TGAGTATCCC
GGCTCGAAGA ATGTCCAGGG CGCCATCCTC TACGCCGAGA TGCTGGAGAA GCTGGTCCCC
AACTTCCGTG AGGATGCTCC GCTGGAGCGG CATCTGGTCG AACAGCGGTT CTGGATGATG
GACGAGAGGG CGCACACCGG CCTGCATTAT CGCTCGGATG ACTTCAACGA AGAGAAGCCG
AACCGCTACA CCATCATCCG CGCCCAGTTC GACAAGTGGT TTTCCAGCAA GGTGCAGGAG
GCCGGCGCAA TCGTGCTGTG CGAGACCACC GTCAAGGAGT TGGTCAAGGA CGCCTATGGC
CGGGTGATCG GCGTGCTCAC CGATCGCGAC GGCGGCGAGG TTCACGCCGA CGTCGTCGTG
CTGGCCGAAG GCGTCAACGG TCTGCTTGGC ACCAAGGCGG ATCTGCGCGA GCGGCCGTCG
GCGGAGAACG TCGCGCTCGC GGTCAAGGAA ATGCACTTCC TTCCGCGCGA GACCATCGAG
GCGCGCTTCA ACCTGAAGGG CGACGAAGGC GTGGTCATCG AGGCGGCTGG CACCATCTCG
CACGGCATGA CCGGCATGGG CTTCATCTAC GCCAACAAGG AGTCGATCTC GGTCGGGATC
GGTTGCCTGG TGGCCGATTT CCAGAAGACT GGTGAGACGC CTTACGGTCT GCTCGAGCGT
TTCAAGAAGC ATCCCTCGGT CGCGCCGCTG ATCGAAGGCT CCGAGGTCAA GGAATATGCC
GGCCATCTCA TTCCCGAGGG CGGCTACAAG GCCATCCCGC AGCTTTACGG CGATGGATGG
GTTGTGGTGG GCGACGCGGC GCAGCTCAAC AATGCGCTGC ATCGCGAAGG CTCGAACCTG
GCGATGACCT CGGGCCGAAT CGCTGGCGAG GCGATCTTTC AGGTCAAATC CCGCAAGGAT
CCGATGACCA AGGAAAATCT CGCGCTTTAC AAGAAGATGC TCGACGCCTC CTTCGTGATC
AAGGATCTGA AGAAATATAA GGATATGCCC GATCTGTTGC ACATCCAGTC GAAGAACTTT
TTCCTGACCT ATCCGCAACT CGTCAACAAG GCGCTACAGA ATTTCGTGCG GGTCGACGGC
ACGCCCAAGG TCGATAAGGA GAAAGTCACG ATCAAATCAT TCGTGTCGGC GCGATCGTGG
GGCGGCCTGT TCGGCGACGC CTTCCGCTTC GCACGGGCCT GGCGGTGA
 
Protein sequence
MIEERFDAIV VGAGMAGNAA ALTMANRGMK VLQIERGEYP GSKNVQGAIL YAEMLEKLVP 
NFREDAPLER HLVEQRFWMM DERAHTGLHY RSDDFNEEKP NRYTIIRAQF DKWFSSKVQE
AGAIVLCETT VKELVKDAYG RVIGVLTDRD GGEVHADVVV LAEGVNGLLG TKADLRERPS
AENVALAVKE MHFLPRETIE ARFNLKGDEG VVIEAAGTIS HGMTGMGFIY ANKESISVGI
GCLVADFQKT GETPYGLLER FKKHPSVAPL IEGSEVKEYA GHLIPEGGYK AIPQLYGDGW
VVVGDAAQLN NALHREGSNL AMTSGRIAGE AIFQVKSRKD PMTKENLALY KKMLDASFVI
KDLKKYKDMP DLLHIQSKNF FLTYPQLVNK ALQNFVRVDG TPKVDKEKVT IKSFVSARSW
GGLFGDAFRF ARAWR