Gene RPD_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1080 
Symbol 
ID4021556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1231943 
End bp1232149 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content57% 
IMG OID637961272 
Producthypothetical protein 
Protein accessionYP_568219 
Protein GI91975560 
COG category[S] Function unknown 
COG ID[COG5420] Uncharacterized conserved small protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA TCGACACGCT GAAAGCCGAA ATCAAGAAGC TGTCCGCGCG CGCGACGACA 
ATGAAGATGA ATCTACACGA TCTGTCGGAG GAACTGCCGA TCAACTGGCA GACCATCATG
ACGGTGGCGC AGCAGACCCA CGATGCTTTC GCGGCGCTCG AAGCCGCGCG AACAACCTTG
AAGGAACTGG AAGCCAAGGC TGCGTGA
 
Protein sequence
MSDIDTLKAE IKKLSARATT MKMNLHDLSE ELPINWQTIM TVAQQTHDAF AALEAARTTL 
KELEAKAA