Gene RPD_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1066 
Symbol 
ID4021542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1220202 
End bp1220741 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID637961258 
Producthypothetical protein 
Protein accessionYP_568205 
Protein GI91975546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATG TCCTGCACAG TGAACTGACG ATGTCCGGAC CCGAACAGTC CATGCTCGGC 
GGCGCGCTGC TCGGTGCGGG CCTGCCGGCC GAGGCGCAGC GTCATCTGGA ACTCGCCGGC
CGCGACTTCC AGAGCGATGT GCTCGCGGAG CAACATCTGC GCGAGGCGCA GTCGCTGGCG
CCCGATCATG CCGCGGTGCT GATCGGCCTG TATCGCTTCT ATTTCTACAA AGGCCGCCTC
GATGAGGCGT TGCGGGTCGC CGAAATCTGC CTGACGAAAG CCGCGCGCGA TAATGGTCTC
GACGCCAACT GGCGCAAGGT TCGGCGCAGC GACGCTGAGT TCTCCAGCTT CGCCGCCATC
CTGCCGCGGT TCTATCTGTT CGCCCTGAAG GCCTATGCCT ATCTGCGGAT GCGGGTTGGC
GACATCGACG AGGGCCATGC TGCGATCGAG AAGCTGCTCG AGCTCGATCC CTCCGACAAG
GTCAATGCCG GCGTGCTGCA CGACGTCTGG CGGCGGATAG GGCAAGTCGA TGACGACTGA
 
Protein sequence
MPHVLHSELT MSGPEQSMLG GALLGAGLPA EAQRHLELAG RDFQSDVLAE QHLREAQSLA 
PDHAAVLIGL YRFYFYKGRL DEALRVAEIC LTKAARDNGL DANWRKVRRS DAEFSSFAAI
LPRFYLFALK AYAYLRMRVG DIDEGHAAIE KLLELDPSDK VNAGVLHDVW RRIGQVDDD