| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1063 |
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| Symbol | |
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| ID | 4021539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1218030 |
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| End bp | 1219589 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961255 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_568202 |
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| Protein GI | 91975543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA AACTTCTCAC GCTGCACGAT TTCGGCGCCC CAGGTGCGAC GTCGTTCGAT
GAATTGCGGC GTAGCGCCGC GCAGTCCGGC TGTAGCAGCA CGGGTGGTAG CGGAAAGTCC
GGCTGCGGCT CGGCGGCGGG CCAGGGCGAC CTGCCGCCGG ACGTCTGGGA GAAGGTGAAG
AACCATCCCT GCTACAGCGA GCAGGCGCAT CACCACTTCG CCCGCATGCA TGTCGCCGTC
GCGCCGGCCT GCAACATCCA GTGCAATTAC TGCAATCGCA AGTATGATTG CGCCAACGAA
TCGCGTCCGG GTGTCGTCAG CGAGAAGCTG TCGCCGGAGC AGGCGGCCCG CAAGGTGATC
GCCGTCGCCT CGACGATTCC GCAGATGACC GTGCTTGGCG TCGCCGGCCC GGGCGATCCG
CTCGCCAACC CGGCGAAGAC CTTCAAGACC TTCGAGCTGG TGTCCGAGAC CGCGCCCGAC
ATCAAGCTGT GCCTGTCGAC CAACGGCCTG ACGCTGCCCG ATCACGTCGA GCGCATCGTC
GCGATGAAAG TCGATCACGT CACCATCACG ATCAACATGA TCGACCCGGA GATCGGCGCG
CAGATCTATC CGTGGATCTT CTACGACCAC CGCCGCATCA CCGGCGTCGA GGCGTCAAAG
ATCCTCAGCG AGCGGCAATT GCTCGGGCTC GAGATGCTCA CCGCGCGCGG CATCCTGGTC
AAGGTCAACT CGGTGATGAT CCCGGGGATC AACGATCGGC ATCTGATCGA GGTCAACAAA
GCGGTGAAAT CGCGCGGCGC CTTCCTGCAC AACATCATGC CGCTGATCTC CGCGCCGGAG
CACGGCACGG TGTTCGGCCT CGAAGGCCGC CGCGGCCCGT CCGCGCAGGA GCTGAAGGCG
CTCCAGGATG ATTGCGAGGG CGAAATGAAC ATGATGCGGC ATTGTCGGCA ATGCCGCGCC
GACGCGGTCG GCCTGCTCGG TGAGGACCGC AGCGCCGAAT TCACCACCAA CAAGGTGATG
GAGATGGAGG TCACATACGA TCTCGCCGCG CGCCAAGCCT ATCAGGCCAA GGTCGAGGCC
GAGCGCGACG CCATCGCTGG CGCCAAGCAG CGCGAGATGG CGACGCTCGC CGATGAGACC
GCCTCGATCA AGATCCAGGT CGCGATCGCG ACCAAGGGCG GCGGCGTGAT CAACGAGCAC
TTCGGCCATG CTCATGAATT CCAGATCTAC GAGGTCTCGA CCGCCGGCGC CAAGTTCATC
GGCCACCGCC GCGTCGATCT GTATTGCGAG GGCGGCTACG CCAGCGACAC CGGGATCGAG
CCGATTCTGA AGGCGCTGAA CGACTGCGCC GCGGTGCTGG TCGCCAAGAT CGGCCTCTGT
CCGAAGGAGT CGCTGGCCGG CGCCGGCATC GAGGCGGTCG AGACCTATGC CTTCGACTAT
ATCGAGCAAT CGGCGATTGC CTATTTCAAG GACTACCTCG ATCGCGTCGG CAAGTCGGAG
ATCAGTCACG TCCAGCGTGG CGATGCCGAC ATTCGCCAGG GCGCATTCGT CACGAGCTGA
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| Protein sequence | MQKKLLTLHD FGAPGATSFD ELRRSAAQSG CSSTGGSGKS GCGSAAGQGD LPPDVWEKVK
NHPCYSEQAH HHFARMHVAV APACNIQCNY CNRKYDCANE SRPGVVSEKL SPEQAARKVI
AVASTIPQMT VLGVAGPGDP LANPAKTFKT FELVSETAPD IKLCLSTNGL TLPDHVERIV
AMKVDHVTIT INMIDPEIGA QIYPWIFYDH RRITGVEASK ILSERQLLGL EMLTARGILV
KVNSVMIPGI NDRHLIEVNK AVKSRGAFLH NIMPLISAPE HGTVFGLEGR RGPSAQELKA
LQDDCEGEMN MMRHCRQCRA DAVGLLGEDR SAEFTTNKVM EMEVTYDLAA RQAYQAKVEA
ERDAIAGAKQ REMATLADET ASIKIQVAIA TKGGGVINEH FGHAHEFQIY EVSTAGAKFI
GHRRVDLYCE GGYASDTGIE PILKALNDCA AVLVAKIGLC PKESLAGAGI EAVETYAFDY
IEQSAIAYFK DYLDRVGKSE ISHVQRGDAD IRQGAFVTS
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